Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 AC079140.4-201ENST00000507448 529 ntBASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 AC087623.3-201ENST00000607047 1098 ntBASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 MIR6084-201ENST00000622012 110 ntBASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
NEUROD4Q9HD90 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 AP004607.4-201ENST00000530158 1459 ntBASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 AC006128.1-201ENST00000624704 1661 ntBASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.62■□□□□ 0.73
NEUROD4Q9HD90 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 AC008175.2-201ENST00000612840 297 ntBASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEUROD4Q9HD90 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 POU5F1P4-201ENST00000413175 1085 ntBASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.6■□□□□ 0.73
NEUROD4Q9HD90 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.59■□□□□ 0.73
NEUROD4Q9HD90 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NEUROD4Q9HD90 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NEUROD4Q9HD90 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NEUROD4Q9HD90 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NEUROD4Q9HD90 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
NEUROD4Q9HD90 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NEUROD4Q9HD90 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NEUROD4Q9HD90 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NEUROD4Q9HD90 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.58■□□□□ 0.72
NEUROD4Q9HD90 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NEUROD4Q9HD90 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NEUROD4Q9HD90 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms