Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1BQ9H9Y6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
POLR1BQ9H9Y6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1BQ9H9Y6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 KRT18P20-201ENST00000548986 1279 ntBASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 AC010536.3-201ENST00000620306 533 ntBASIC20.52■□□□□ 0.88
POLR1BQ9H9Y6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
POLR1BQ9H9Y6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR1BQ9H9Y6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 AC093827.2-201ENST00000512654 315 ntBASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR1BQ9H9Y6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 AC092667.1-201ENST00000434301 2586 ntBASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 AC055733.4-201ENST00000638462 1354 ntBASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 AC010141.2-201ENST00000452426 721 ntBASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 MIR4758-201ENST00000577688 71 ntBASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR1BQ9H9Y6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms