Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEC61A2Q9H9S3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SEC61A2Q9H9S3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEC61A2Q9H9S3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEC61A2Q9H9S3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEC61A2Q9H9S3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SEC61A2Q9H9S3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms