Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.75■□□□□ 0.75
NANOGQ9H9S0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NANOGQ9H9S0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 MIR4466-201ENST00000606121 54 ntBASIC19.74■□□□□ 0.75
NANOGQ9H9S0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NANOGQ9H9S0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NANOGQ9H9S0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 AC133561.4-201ENST00000566112 224 ntBASIC19.72■□□□□ 0.75
NANOGQ9H9S0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NANOGQ9H9S0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NANOGQ9H9S0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.7■□□□□ 0.74
NANOGQ9H9S0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms