Protein–RNA interactions for Protein: Q9H5V9

CXorf56, UPF0428 protein CXorf56, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf56Q9H5V9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CXorf56Q9H5V9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CXorf56Q9H5V9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 AC116562.4-201ENST00000641316 2276 ntBASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CXorf56Q9H5V9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 AL139246.5-201ENST00000606645 996 ntBASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXorf56Q9H5V9 ALDH1A3-203ENST00000557963 1670 ntBASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 MIR6724-1-201ENST00000616420 92 ntBASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 MIR6724-2-201ENST00000616483 92 ntBASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 MIR6724-4-201ENST00000617390 92 ntBASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 MIR6724-3-201ENST00000622482 92 ntBASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXorf56Q9H5V9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 MIR638-201ENST00000385237 100 ntBASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 AL136116.3-201ENST00000402907 1138 ntBASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 AC131281.2-201ENST00000520478 145 ntBASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 AL356740.2-201ENST00000601559 647 ntBASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXorf56Q9H5V9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CXorf56Q9H5V9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CXorf56Q9H5V9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CXorf56Q9H5V9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CXorf56Q9H5V9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.14■□□□□ 0.81
CXorf56Q9H5V9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.14■□□□□ 0.81
CXorf56Q9H5V9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.14■□□□□ 0.81
CXorf56Q9H5V9 AL117332.1-201ENST00000622628 974 ntBASIC20.14■□□□□ 0.81
CXorf56Q9H5V9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CXorf56Q9H5V9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms