Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP4BQ9H444 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP4BQ9H444 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP4BQ9H444 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.25■■□□□ 1.79
CHMP4BQ9H444 AC245052.3-201ENST00000450182 901 ntBASIC26.25■■□□□ 1.79
CHMP4BQ9H444 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP4BQ9H444 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC26.25■■□□□ 1.79
CHMP4BQ9H444 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC26.25■■□□□ 1.79
CHMP4BQ9H444 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP4BQ9H444 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 KRT19P1-201ENST00000405746 1186 ntBASIC26.24■■□□□ 1.79
CHMP4BQ9H444 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 AC006128.1-201ENST00000624704 1661 ntBASIC26.24■■□□□ 1.79
CHMP4BQ9H444 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CHMP4BQ9H444 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 SLC7A5P1-201ENST00000568957 537 ntBASIC26.23■■□□□ 1.79
CHMP4BQ9H444 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.23■■□□□ 1.79
CHMP4BQ9H444 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.22■■□□□ 1.79
CHMP4BQ9H444 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.22■■□□□ 1.79
CHMP4BQ9H444 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.22■■□□□ 1.79
CHMP4BQ9H444 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHMP4BQ9H444 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHMP4BQ9H444 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHMP4BQ9H444 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHMP4BQ9H444 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.21■■□□□ 1.79
CHMP4BQ9H444 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHMP4BQ9H444 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.21■■□□□ 1.79
CHMP4BQ9H444 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.21■■□□□ 1.79
CHMP4BQ9H444 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHMP4BQ9H444 AC004854.2-201ENST00000608450 1441 ntBASIC26.21■■□□□ 1.79
CHMP4BQ9H444 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CHMP4BQ9H444 AC011484.1-201ENST00000377652 1995 ntBASIC26.2■■□□□ 1.79
CHMP4BQ9H444 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CHMP4BQ9H444 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.79
CHMP4BQ9H444 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHMP4BQ9H444 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP4BQ9H444 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms