Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 AC106739.1-201ENST00000617035 715 ntBASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 BX005040.4-201ENST00000637145 1518 ntBASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 TSPY26P-201ENST00000476365 1326 ntBASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
POLR2J3Q9H1A7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 AC008406.3-201ENST00000620001 1374 ntBASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
POLR2J3Q9H1A7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 MIR572-201ENST00000384983 95 ntBASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
POLR2J3Q9H1A7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 AC006128.1-201ENST00000624704 1661 ntBASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2J3Q9H1A7 RASA4CP-201ENST00000424092 1398 ntBASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 AC092667.1-201ENST00000434301 2586 ntBASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 PBX2P1-201ENST00000493219 1291 ntBASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 AL355001.2-201ENST00000620617 1191 ntBASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2J3Q9H1A7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 AC096631.2-201ENST00000436136 790 ntBASIC19.18■□□□□ 0.66
POLR2J3Q9H1A7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms