Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 AC007225.1-201ENST00000566331 1836 ntBASIC21.7■■□□□ 1.06
DDX47Q9H0S4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX47Q9H0S4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX47Q9H0S4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
DDX47Q9H0S4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX47Q9H0S4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX47Q9H0S4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX47Q9H0S4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX47Q9H0S4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX47Q9H0S4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 AC020907.5-201ENST00000624372 1936 ntBASIC21.68■■□□□ 1.06
DDX47Q9H0S4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX47Q9H0S4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 AC112907.3-201ENST00000577781 2400 ntBASIC21.67■■□□□ 1.06
DDX47Q9H0S4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX47Q9H0S4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX47Q9H0S4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX47Q9H0S4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms