Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CLPBQ9H078 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.94■□□□□ 0.94
CLPBQ9H078 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLPBQ9H078 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.94■□□□□ 0.94
CLPBQ9H078 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.94■□□□□ 0.94
CLPBQ9H078 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.94■□□□□ 0.94
CLPBQ9H078 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.94■□□□□ 0.94
CLPBQ9H078 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CLPBQ9H078 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.94■□□□□ 0.94
CLPBQ9H078 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLPBQ9H078 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.93■□□□□ 0.94
CLPBQ9H078 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLPBQ9H078 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLPBQ9H078 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLPBQ9H078 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.93■□□□□ 0.94
CLPBQ9H078 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLPBQ9H078 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.93■□□□□ 0.94
CLPBQ9H078 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.93■□□□□ 0.94
CLPBQ9H078 AC138907.5-202ENST00000569484 235 ntBASIC20.93■□□□□ 0.94
CLPBQ9H078 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.93■□□□□ 0.94
CLPBQ9H078 AL109923.1-201ENST00000618799 583 ntBASIC20.93■□□□□ 0.94
CLPBQ9H078 MYCNOS-205ENST00000641950 531 ntBASIC20.93■□□□□ 0.94
CLPBQ9H078 AC026310.3-201ENST00000625186 2373 ntBASIC20.93■□□□□ 0.94
CLPBQ9H078 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLPBQ9H078 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPBQ9H078 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPBQ9H078 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPBQ9H078 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPBQ9H078 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPBQ9H078 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPBQ9H078 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPBQ9H078 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.92■□□□□ 0.94
CLPBQ9H078 AC010141.2-201ENST00000452426 721 ntBASIC20.92■□□□□ 0.94
CLPBQ9H078 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CLPBQ9H078 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.92■□□□□ 0.94
CLPBQ9H078 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLPBQ9H078 AL050303.2-201ENST00000619798 666 ntBASIC20.92■□□□□ 0.94
CLPBQ9H078 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CLPBQ9H078 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPBQ9H078 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLPBQ9H078 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CLPBQ9H078 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.92■□□□□ 0.94
CLPBQ9H078 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.92■□□□□ 0.94
CLPBQ9H078 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.92■□□□□ 0.94
CLPBQ9H078 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.92■□□□□ 0.94
CLPBQ9H078 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLPBQ9H078 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CLPBQ9H078 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPBQ9H078 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLPBQ9H078 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPBQ9H078 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.91■□□□□ 0.94
CLPBQ9H078 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPBQ9H078 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLPBQ9H078 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLPBQ9H078 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLPBQ9H078 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.91■□□□□ 0.94
CLPBQ9H078 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.91■□□□□ 0.94
CLPBQ9H078 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.91■□□□□ 0.94
CLPBQ9H078 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CLPBQ9H078 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLPBQ9H078 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CLPBQ9H078 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLPBQ9H078 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.9■□□□□ 0.94
CLPBQ9H078 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.9■□□□□ 0.94
CLPBQ9H078 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPBQ9H078 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
CLPBQ9H078 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
CLPBQ9H078 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPBQ9H078 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.9■□□□□ 0.94
CLPBQ9H078 AL024507.2-201ENST00000606070 2574 ntBASIC20.9■□□□□ 0.94
CLPBQ9H078 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPBQ9H078 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPBQ9H078 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPBQ9H078 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLPBQ9H078 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLPBQ9H078 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLPBQ9H078 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPBQ9H078 AC231657.2-201ENST00000624556 255 ntBASIC20.9■□□□□ 0.94
CLPBQ9H078 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.9■□□□□ 0.94
CLPBQ9H078 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPBQ9H078 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CLPBQ9H078 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLPBQ9H078 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
CLPBQ9H078 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLPBQ9H078 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLPBQ9H078 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.89■□□□□ 0.93
CLPBQ9H078 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.89■□□□□ 0.93
CLPBQ9H078 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.89■□□□□ 0.93
CLPBQ9H078 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms