Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF4Q9BUZ4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 AL020996.1-203ENST00000536896 2307 ntBASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 ID1-201ENST00000376105 1233 ntBASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 AC080038.1-201ENST00000611274 1154 ntBASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAF4Q9BUZ4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF4Q9BUZ4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 KRT19P1-201ENST00000405746 1186 ntBASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 LINC01006-201ENST00000333319 2292 ntBASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF4Q9BUZ4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAF4Q9BUZ4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAF4Q9BUZ4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
TRAF4Q9BUZ4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAF4Q9BUZ4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms