Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
COPS4Q9BT78 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COPS4Q9BT78 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COPS4Q9BT78 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS4Q9BT78 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPS4Q9BT78 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS4Q9BT78 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS4Q9BT78 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPS4Q9BT78 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS4Q9BT78 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS4Q9BT78 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.06■□□□□ 0.64
COPS4Q9BT78 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.06■□□□□ 0.64
COPS4Q9BT78 MIR3181-201ENST00000578512 73 ntBASIC19.06■□□□□ 0.64
COPS4Q9BT78 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COPS4Q9BT78 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPS4Q9BT78 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.06■□□□□ 0.64
COPS4Q9BT78 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS4Q9BT78 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS4Q9BT78 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS4Q9BT78 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPS4Q9BT78 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPS4Q9BT78 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS4Q9BT78 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPS4Q9BT78 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPS4Q9BT78 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.05■□□□□ 0.64
COPS4Q9BT78 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.04■□□□□ 0.64
COPS4Q9BT78 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COPS4Q9BT78 PLK5-205ENST00000642079 1969 ntBASIC19.04■□□□□ 0.64
COPS4Q9BT78 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS4Q9BT78 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COPS4Q9BT78 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS4Q9BT78 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.04■□□□□ 0.64
COPS4Q9BT78 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS4Q9BT78 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS4Q9BT78 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPS4Q9BT78 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.04■□□□□ 0.64
COPS4Q9BT78 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.03■□□□□ 0.64
COPS4Q9BT78 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.03■□□□□ 0.64
COPS4Q9BT78 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.03■□□□□ 0.64
COPS4Q9BT78 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
COPS4Q9BT78 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.03■□□□□ 0.64
COPS4Q9BT78 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.03■□□□□ 0.64
COPS4Q9BT78 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
COPS4Q9BT78 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.03■□□□□ 0.64
COPS4Q9BT78 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.03■□□□□ 0.64
COPS4Q9BT78 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COPS4Q9BT78 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.03■□□□□ 0.64
COPS4Q9BT78 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
COPS4Q9BT78 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.02■□□□□ 0.64
COPS4Q9BT78 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.02■□□□□ 0.64
COPS4Q9BT78 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.02■□□□□ 0.64
COPS4Q9BT78 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COPS4Q9BT78 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.02■□□□□ 0.64
COPS4Q9BT78 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COPS4Q9BT78 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
COPS4Q9BT78 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COPS4Q9BT78 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.02■□□□□ 0.64
COPS4Q9BT78 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.02■□□□□ 0.64
COPS4Q9BT78 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.02■□□□□ 0.64
COPS4Q9BT78 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.02■□□□□ 0.64
COPS4Q9BT78 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COPS4Q9BT78 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
COPS4Q9BT78 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
COPS4Q9BT78 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COPS4Q9BT78 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
COPS4Q9BT78 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COPS4Q9BT78 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COPS4Q9BT78 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COPS4Q9BT78 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COPS4Q9BT78 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COPS4Q9BT78 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
COPS4Q9BT78 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COPS4Q9BT78 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.01■□□□□ 0.63
COPS4Q9BT78 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COPS4Q9BT78 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.01■□□□□ 0.63
COPS4Q9BT78 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COPS4Q9BT78 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms