Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.31■□□□□ 0.52
VRK1Q99986 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.31■□□□□ 0.52
VRK1Q99986 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.31■□□□□ 0.52
VRK1Q99986 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.31■□□□□ 0.52
VRK1Q99986 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.31■□□□□ 0.52
VRK1Q99986 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK1Q99986 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK1Q99986 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VRK1Q99986 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK1Q99986 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VRK1Q99986 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK1Q99986 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 FAM99A-202ENST00000538190 1989 ntBASIC18.3■□□□□ 0.52
VRK1Q99986 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
VRK1Q99986 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.3■□□□□ 0.52
VRK1Q99986 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.3■□□□□ 0.52
VRK1Q99986 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VRK1Q99986 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.3■□□□□ 0.52
VRK1Q99986 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VRK1Q99986 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.29■□□□□ 0.52
VRK1Q99986 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.29■□□□□ 0.52
VRK1Q99986 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
VRK1Q99986 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK1Q99986 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK1Q99986 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
VRK1Q99986 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.29■□□□□ 0.52
VRK1Q99986 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.29■□□□□ 0.52
VRK1Q99986 AC080038.1-201ENST00000611274 1154 ntBASIC18.29■□□□□ 0.52
VRK1Q99986 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.29■□□□□ 0.52
VRK1Q99986 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK1Q99986 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK1Q99986 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VRK1Q99986 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
VRK1Q99986 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VRK1Q99986 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VRK1Q99986 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.28■□□□□ 0.52
VRK1Q99986 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VRK1Q99986 AC080038.3-201ENST00000623346 1952 ntBASIC18.28■□□□□ 0.52
VRK1Q99986 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.28■□□□□ 0.52
VRK1Q99986 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VRK1Q99986 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.28■□□□□ 0.52
VRK1Q99986 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.28■□□□□ 0.52
VRK1Q99986 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.28■□□□□ 0.52
VRK1Q99986 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.28■□□□□ 0.52
VRK1Q99986 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VRK1Q99986 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VRK1Q99986 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VRK1Q99986 KRT87P-202ENST00000534226 1464 ntBASIC18.27■□□□□ 0.52
VRK1Q99986 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VRK1Q99986 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VRK1Q99986 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VRK1Q99986 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
VRK1Q99986 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
VRK1Q99986 AC006015.1-201ENST00000429970 570 ntBASIC18.27■□□□□ 0.52
VRK1Q99986 BID-214ENST00000617586 542 ntTSL 5 BASIC18.27■□□□□ 0.52
VRK1Q99986 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VRK1Q99986 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VRK1Q99986 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
VRK1Q99986 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VRK1Q99986 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VRK1Q99986 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.26■□□□□ 0.51
VRK1Q99986 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VRK1Q99986 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.26■□□□□ 0.51
VRK1Q99986 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.26■□□□□ 0.51
VRK1Q99986 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 AC104187.1-201ENST00000607510 612 ntBASIC18.26■□□□□ 0.51
VRK1Q99986 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
VRK1Q99986 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
VRK1Q99986 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VRK1Q99986 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VRK1Q99986 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VRK1Q99986 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VRK1Q99986 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK1Q99986 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.25■□□□□ 0.51
VRK1Q99986 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VRK1Q99986 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
VRK1Q99986 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.25■□□□□ 0.51
VRK1Q99986 AL034346.1-201ENST00000568244 1277 ntBASIC18.25■□□□□ 0.51
VRK1Q99986 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
VRK1Q99986 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms