Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.61■□□□□ 0.73
PKP2Q99959 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.61■□□□□ 0.73
PKP2Q99959 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PKP2Q99959 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PKP2Q99959 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.6■□□□□ 0.73
PKP2Q99959 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PKP2Q99959 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PKP2Q99959 AC116562.4-201ENST00000641316 2276 ntBASIC19.6■□□□□ 0.73
PKP2Q99959 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.6■□□□□ 0.73
PKP2Q99959 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP2Q99959 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PKP2Q99959 BX323043.1-201ENST00000641006 1765 ntBASIC19.6■□□□□ 0.73
PKP2Q99959 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP2Q99959 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.59■□□□□ 0.73
PKP2Q99959 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.59■□□□□ 0.73
PKP2Q99959 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PKP2Q99959 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.59■□□□□ 0.73
PKP2Q99959 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.59■□□□□ 0.73
PKP2Q99959 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.59■□□□□ 0.73
PKP2Q99959 AL451085.2-201ENST00000605085 799 ntBASIC19.59■□□□□ 0.73
PKP2Q99959 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.59■□□□□ 0.73
PKP2Q99959 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.59■□□□□ 0.73
PKP2Q99959 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP2Q99959 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP2Q99959 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PKP2Q99959 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PKP2Q99959 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PKP2Q99959 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PKP2Q99959 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PKP2Q99959 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PKP2Q99959 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PKP2Q99959 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.73
PKP2Q99959 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PKP2Q99959 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.58■□□□□ 0.72
PKP2Q99959 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.58■□□□□ 0.72
PKP2Q99959 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP2Q99959 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP2Q99959 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.58■□□□□ 0.72
PKP2Q99959 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP2Q99959 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.58■□□□□ 0.72
PKP2Q99959 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP2Q99959 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PKP2Q99959 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.57■□□□□ 0.72
PKP2Q99959 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP2Q99959 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.57■□□□□ 0.72
PKP2Q99959 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.57■□□□□ 0.72
PKP2Q99959 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.57■□□□□ 0.72
PKP2Q99959 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.57■□□□□ 0.72
PKP2Q99959 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.57■□□□□ 0.72
PKP2Q99959 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
PKP2Q99959 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.57■□□□□ 0.72
PKP2Q99959 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP2Q99959 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PKP2Q99959 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP2Q99959 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP2Q99959 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PKP2Q99959 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 AC133637.1-201ENST00000624115 1537 ntBASIC19.56■□□□□ 0.72
PKP2Q99959 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PKP2Q99959 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.56■□□□□ 0.72
PKP2Q99959 AL031848.2-201ENST00000607670 837 ntBASIC19.56■□□□□ 0.72
PKP2Q99959 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PKP2Q99959 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PKP2Q99959 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PKP2Q99959 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP2Q99959 AC019069.1-201ENST00000610008 1333 ntBASIC19.55■□□□□ 0.72
PKP2Q99959 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP2Q99959 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PKP2Q99959 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP2Q99959 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PKP2Q99959 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP2Q99959 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP2Q99959 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.55■□□□□ 0.72
PKP2Q99959 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP2Q99959 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP2Q99959 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.55■□□□□ 0.72
PKP2Q99959 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.55■□□□□ 0.72
PKP2Q99959 Z92544.1-202ENST00000571933 1220 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms