Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SNX18Q96RF0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX18Q96RF0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
SNX18Q96RF0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX18Q96RF0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SNX18Q96RF0 AC126544.1-201ENST00000580842 1059 ntBASIC18.9■□□□□ 0.62
SNX18Q96RF0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX18Q96RF0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX18Q96RF0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.9■□□□□ 0.62
SNX18Q96RF0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX18Q96RF0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX18Q96RF0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX18Q96RF0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNX18Q96RF0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNX18Q96RF0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SNX18Q96RF0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SNX18Q96RF0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.89■□□□□ 0.61
SNX18Q96RF0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.89■□□□□ 0.61
SNX18Q96RF0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SNX18Q96RF0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX18Q96RF0 AC027682.1-201ENST00000562846 899 ntBASIC18.89■□□□□ 0.61
SNX18Q96RF0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX18Q96RF0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SNX18Q96RF0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.89■□□□□ 0.61
SNX18Q96RF0 AC009237.3-201ENST00000393279 1427 ntBASIC18.89■□□□□ 0.61
SNX18Q96RF0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SNX18Q96RF0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNX18Q96RF0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX18Q96RF0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX18Q96RF0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SNX18Q96RF0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX18Q96RF0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX18Q96RF0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX18Q96RF0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX18Q96RF0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX18Q96RF0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX18Q96RF0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.88■□□□□ 0.61
SNX18Q96RF0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX18Q96RF0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX18Q96RF0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX18Q96RF0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX18Q96RF0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SNX18Q96RF0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.88■□□□□ 0.61
SNX18Q96RF0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.88■□□□□ 0.61
SNX18Q96RF0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
SNX18Q96RF0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX18Q96RF0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX18Q96RF0 RASA4CP-201ENST00000424092 1398 ntBASIC18.87■□□□□ 0.61
SNX18Q96RF0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
SNX18Q96RF0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX18Q96RF0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX18Q96RF0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SNX18Q96RF0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNX18Q96RF0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX18Q96RF0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX18Q96RF0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX18Q96RF0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SNX18Q96RF0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SNX18Q96RF0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX18Q96RF0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SNX18Q96RF0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX18Q96RF0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX18Q96RF0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNX18Q96RF0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX18Q96RF0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX18Q96RF0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX18Q96RF0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX18Q96RF0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX18Q96RF0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX18Q96RF0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SNX18Q96RF0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
SNX18Q96RF0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNX18Q96RF0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX18Q96RF0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms