Protein–RNA interactions for Protein: Q96MT7

CFAP44, Cilia- and flagella-associated protein 44, humanhuman

Predictions only

Length 982 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP44Q96MT7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CFAP44Q96MT7 AC068338.2-201ENST00000563278 1430 ntBASIC27.14■■□□□ 1.93
CFAP44Q96MT7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
CFAP44Q96MT7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CFAP44Q96MT7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC27.13■■□□□ 1.93
CFAP44Q96MT7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC27.12■■□□□ 1.93
CFAP44Q96MT7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP44Q96MT7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP44Q96MT7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP44Q96MT7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP44Q96MT7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.12■■□□□ 1.93
CFAP44Q96MT7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CFAP44Q96MT7 MIR663A-201ENST00000385250 93 ntBASIC27.12■■□□□ 1.93
CFAP44Q96MT7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC27.12■■□□□ 1.93
CFAP44Q96MT7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.12■■□□□ 1.93
CFAP44Q96MT7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
CFAP44Q96MT7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
CFAP44Q96MT7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CFAP44Q96MT7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CFAP44Q96MT7 AC091799.1-201ENST00000422823 811 ntBASIC27.11■■□□□ 1.93
CFAP44Q96MT7 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.11■■□□□ 1.93
CFAP44Q96MT7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
CFAP44Q96MT7 AC005181.1-201ENST00000604782 1256 ntBASIC27.11■■□□□ 1.93
CFAP44Q96MT7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CFAP44Q96MT7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 AC245052.3-201ENST00000450182 901 ntBASIC27.1■■□□□ 1.93
CFAP44Q96MT7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFAP44Q96MT7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP44Q96MT7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP44Q96MT7 HLA-L-209ENST00000420110 1011 ntBASIC27.09■■□□□ 1.93
CFAP44Q96MT7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.09■■□□□ 1.93
CFAP44Q96MT7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
CFAP44Q96MT7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP44Q96MT7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP44Q96MT7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC27.09■■□□□ 1.93
CFAP44Q96MT7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
CFAP44Q96MT7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CFAP44Q96MT7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
CFAP44Q96MT7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CFAP44Q96MT7 WWC2-AS2-201ENST00000578387 2183 ntBASIC27.08■■□□□ 1.93
CFAP44Q96MT7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CFAP44Q96MT7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC27.08■■□□□ 1.93
CFAP44Q96MT7 NCF1B-203ENST00000435988 1254 ntBASIC27.08■■□□□ 1.93
CFAP44Q96MT7 AC006970.2-201ENST00000450065 779 ntBASIC27.08■■□□□ 1.93
CFAP44Q96MT7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.08■■□□□ 1.93
CFAP44Q96MT7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.08■■□□□ 1.93
CFAP44Q96MT7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CFAP44Q96MT7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CFAP44Q96MT7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.08■■□□□ 1.93
CFAP44Q96MT7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC27.08■■□□□ 1.92
CFAP44Q96MT7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 AL162412.1-201ENST00000567129 965 ntBASIC27.07■■□□□ 1.92
CFAP44Q96MT7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
CFAP44Q96MT7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CFAP44Q96MT7 AL591742.1-201ENST00000604433 565 ntBASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms