Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 AC020907.5-201ENST00000624372 1936 ntBASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NSMCE2Q96MF7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 AC092171.4-201ENST00000609130 632 ntBASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.63■□□□□ 0.73
NSMCE2Q96MF7 AC007225.1-201ENST00000566331 1836 ntBASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 AC009299.2-201ENST00000482477 511 ntBASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NSMCE2Q96MF7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NSMCE2Q96MF7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
NSMCE2Q96MF7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.59■□□□□ 0.73
NSMCE2Q96MF7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms