Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SMARCD1Q96GM5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SMARCD1Q96GM5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMARCD1Q96GM5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMARCD1Q96GM5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 HLA-L-209ENST00000420110 1011 ntBASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 AL121832.2-201ENST00000610979 668 ntBASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMARCD1Q96GM5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 GPX1P1-201ENST00000388829 606 ntBASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 AC133552.2-202ENST00000575694 574 ntBASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 AC069236.1-201ENST00000604339 616 ntBASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SMARCD1Q96GM5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 LINC00565-201ENST00000562710 2331 ntBASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 AC008694.1-202ENST00000636953 945 ntBASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SMARCD1Q96GM5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 AC083906.2-201ENST00000511578 360 ntBASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 AC104771.1-201ENST00000603335 964 ntBASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 OR10C1-204ENST00000622521 1039 ntBASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCD1Q96GM5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
SMARCD1Q96GM5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 AF201337.1-201ENST00000520239 748 ntBASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 AL109923.1-201ENST00000618799 583 ntBASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SMARCD1Q96GM5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCD1Q96GM5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCD1Q96GM5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCD1Q96GM5 CDV3P1-201ENST00000471403 739 ntBASIC21.94■■□□□ 1.1
SMARCD1Q96GM5 AC105036.2-201ENST00000569468 176 ntBASIC21.94■■□□□ 1.1
SMARCD1Q96GM5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms