Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.41■■□□□ 1.02
IFT43Q96FT9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IFT43Q96FT9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.41■■□□□ 1.02
IFT43Q96FT9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFT43Q96FT9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
IFT43Q96FT9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.4■■□□□ 1.02
IFT43Q96FT9 AC004854.2-201ENST00000608450 1441 ntBASIC21.4■■□□□ 1.02
IFT43Q96FT9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFT43Q96FT9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFT43Q96FT9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.4■■□□□ 1.02
IFT43Q96FT9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.4■■□□□ 1.02
IFT43Q96FT9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
IFT43Q96FT9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IFT43Q96FT9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.4■■□□□ 1.02
IFT43Q96FT9 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.4■■□□□ 1.02
IFT43Q96FT9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
IFT43Q96FT9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IFT43Q96FT9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFT43Q96FT9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFT43Q96FT9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFT43Q96FT9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
IFT43Q96FT9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
IFT43Q96FT9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
IFT43Q96FT9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
IFT43Q96FT9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
IFT43Q96FT9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IFT43Q96FT9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.39■■□□□ 1.01
IFT43Q96FT9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
IFT43Q96FT9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
IFT43Q96FT9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.39■■□□□ 1.01
IFT43Q96FT9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IFT43Q96FT9 AC080038.1-201ENST00000611274 1154 ntBASIC21.39■■□□□ 1.01
IFT43Q96FT9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
IFT43Q96FT9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IFT43Q96FT9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IFT43Q96FT9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
IFT43Q96FT9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.38■■□□□ 1.01
IFT43Q96FT9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.38■■□□□ 1.01
IFT43Q96FT9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.38■■□□□ 1.01
IFT43Q96FT9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFT43Q96FT9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
IFT43Q96FT9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.37■■□□□ 1.01
IFT43Q96FT9 KRT18P11-201ENST00000435214 1283 ntBASIC21.37■■□□□ 1.01
IFT43Q96FT9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.37■■□□□ 1.01
IFT43Q96FT9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.37■■□□□ 1.01
IFT43Q96FT9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.37■■□□□ 1.01
IFT43Q96FT9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 Z98882.1-201ENST00000622160 2253 ntBASIC21.37■■□□□ 1.01
IFT43Q96FT9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
IFT43Q96FT9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
IFT43Q96FT9 KRT87P-202ENST00000534226 1464 ntBASIC21.37■■□□□ 1.01
IFT43Q96FT9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
IFT43Q96FT9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
IFT43Q96FT9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.37■■□□□ 1.01
IFT43Q96FT9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IFT43Q96FT9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFT43Q96FT9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.36■■□□□ 1.01
IFT43Q96FT9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
IFT43Q96FT9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.36■■□□□ 1.01
IFT43Q96FT9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IFT43Q96FT9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFT43Q96FT9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IFT43Q96FT9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IFT43Q96FT9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.36■■□□□ 1.01
IFT43Q96FT9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFT43Q96FT9 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.36■■□□□ 1.01
IFT43Q96FT9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.36■■□□□ 1.01
IFT43Q96FT9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFT43Q96FT9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.36■■□□□ 1.01
IFT43Q96FT9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFT43Q96FT9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
IFT43Q96FT9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
IFT43Q96FT9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.36■■□□□ 1.01
IFT43Q96FT9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFT43Q96FT9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms