Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 AC091305.1-201ENST00000479476 895 ntBASIC21.05■□□□□ 0.96
LRRC39Q96DD0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 AC007225.1-201ENST00000566331 1836 ntBASIC21.05■□□□□ 0.96
LRRC39Q96DD0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC39Q96DD0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 MIR939-201ENST00000401314 82 ntBASIC21.04■□□□□ 0.96
LRRC39Q96DD0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 AC012414.1-201ENST00000556676 535 ntBASIC21.04■□□□□ 0.96
LRRC39Q96DD0 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC39Q96DD0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 AC092667.1-201ENST00000434301 2586 ntBASIC21.03■□□□□ 0.96
LRRC39Q96DD0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC39Q96DD0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 AP004607.4-201ENST00000530158 1459 ntBASIC21.02■□□□□ 0.96
LRRC39Q96DD0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC39Q96DD0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC39Q96DD0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
LRRC39Q96DD0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.02■□□□□ 0.95
LRRC39Q96DD0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC39Q96DD0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC39Q96DD0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 AC011484.1-201ENST00000377652 1995 ntBASIC21.01■□□□□ 0.95
LRRC39Q96DD0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRC39Q96DD0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21■□□□□ 0.95
LRRC39Q96DD0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
LRRC39Q96DD0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC39Q96DD0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC39Q96DD0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC39Q96DD0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms