Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CTHRC1Q96CG8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTHRC1Q96CG8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.38■□□□□ 0.69
CTHRC1Q96CG8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTHRC1Q96CG8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTHRC1Q96CG8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTHRC1Q96CG8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTHRC1Q96CG8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CTHRC1Q96CG8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTHRC1Q96CG8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 AC016769.1-201ENST00000409132 1010 ntBASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 AC091799.1-201ENST00000422823 811 ntBASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 MFSD11-216ENST00000590393 1141 ntBASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 AC010536.3-201ENST00000620306 533 ntBASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CTHRC1Q96CG8 PLK5-205ENST00000642079 1969 ntBASIC19.33■□□□□ 0.69
CTHRC1Q96CG8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTHRC1Q96CG8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTHRC1Q96CG8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 AC092437.1-201ENST00000624794 1048 ntBASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 AC011484.1-201ENST00000377652 1995 ntBASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTHRC1Q96CG8 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 AC121338.2-201ENST00000622535 1744 ntBASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms