Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS33AQ96AX1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS33AQ96AX1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
VPS33AQ96AX1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 AC133561.4-201ENST00000566112 224 ntBASIC19.95■□□□□ 0.78
VPS33AQ96AX1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS33AQ96AX1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 AC121338.2-201ENST00000622535 1744 ntBASIC19.94■□□□□ 0.78
VPS33AQ96AX1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS33AQ96AX1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms