Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
COL26A1Q96A83 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
COL26A1Q96A83 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL26A1Q96A83 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL26A1Q96A83 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL26A1Q96A83 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.08■□□□□ 0.81
COL26A1Q96A83 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL26A1Q96A83 AC010542.4-201ENST00000563151 1910 ntBASIC20.08■□□□□ 0.81
COL26A1Q96A83 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.08■□□□□ 0.81
COL26A1Q96A83 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
COL26A1Q96A83 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL26A1Q96A83 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL26A1Q96A83 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL26A1Q96A83 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.08■□□□□ 0.81
COL26A1Q96A83 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL26A1Q96A83 AC053503.5-201ENST00000601508 636 ntBASIC20.08■□□□□ 0.81
COL26A1Q96A83 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.08■□□□□ 0.81
COL26A1Q96A83 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
COL26A1Q96A83 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL26A1Q96A83 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL26A1Q96A83 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL26A1Q96A83 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL26A1Q96A83 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.08■□□□□ 0.8
COL26A1Q96A83 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
COL26A1Q96A83 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.07■□□□□ 0.8
COL26A1Q96A83 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.07■□□□□ 0.8
COL26A1Q96A83 EEF1DP3-203ENST00000566025 782 ntBASIC20.07■□□□□ 0.8
COL26A1Q96A83 AC138907.5-202ENST00000569484 235 ntBASIC20.07■□□□□ 0.8
COL26A1Q96A83 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.07■□□□□ 0.8
COL26A1Q96A83 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.07■□□□□ 0.8
COL26A1Q96A83 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL26A1Q96A83 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL26A1Q96A83 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL26A1Q96A83 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL26A1Q96A83 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL26A1Q96A83 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL26A1Q96A83 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.06■□□□□ 0.8
COL26A1Q96A83 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL26A1Q96A83 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
COL26A1Q96A83 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
COL26A1Q96A83 AC010141.2-201ENST00000452426 721 ntBASIC20.06■□□□□ 0.8
COL26A1Q96A83 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL26A1Q96A83 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
COL26A1Q96A83 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.06■□□□□ 0.8
COL26A1Q96A83 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL26A1Q96A83 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL26A1Q96A83 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL26A1Q96A83 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL26A1Q96A83 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.06■□□□□ 0.8
COL26A1Q96A83 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL26A1Q96A83 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL26A1Q96A83 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL26A1Q96A83 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL26A1Q96A83 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL26A1Q96A83 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
COL26A1Q96A83 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL26A1Q96A83 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.05■□□□□ 0.8
COL26A1Q96A83 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.05■□□□□ 0.8
COL26A1Q96A83 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.05■□□□□ 0.8
COL26A1Q96A83 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.05■□□□□ 0.8
COL26A1Q96A83 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.05■□□□□ 0.8
COL26A1Q96A83 UBE2DNL-204ENST00000602536 740 ntBASIC20.05■□□□□ 0.8
COL26A1Q96A83 AC011767.1-201ENST00000617410 1153 ntBASIC20.05■□□□□ 0.8
COL26A1Q96A83 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL26A1Q96A83 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.05■□□□□ 0.8
COL26A1Q96A83 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL26A1Q96A83 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL26A1Q96A83 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL26A1Q96A83 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
COL26A1Q96A83 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.04■□□□□ 0.8
COL26A1Q96A83 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL26A1Q96A83 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL26A1Q96A83 AC003102.1-202ENST00000563394 1796 ntBASIC20.03■□□□□ 0.8
COL26A1Q96A83 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COL26A1Q96A83 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL26A1Q96A83 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.03■□□□□ 0.8
COL26A1Q96A83 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.03■□□□□ 0.8
COL26A1Q96A83 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL26A1Q96A83 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL26A1Q96A83 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms