Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RDH11Q8TC12 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RDH11Q8TC12 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RDH11Q8TC12 AC027702.1-201ENST00000563810 1770 ntBASIC20.51■□□□□ 0.87
RDH11Q8TC12 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.51■□□□□ 0.87
RDH11Q8TC12 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RDH11Q8TC12 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.51■□□□□ 0.87
RDH11Q8TC12 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
RDH11Q8TC12 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.5■□□□□ 0.87
RDH11Q8TC12 AC020907.5-201ENST00000624372 1936 ntBASIC20.5■□□□□ 0.87
RDH11Q8TC12 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.5■□□□□ 0.87
RDH11Q8TC12 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RDH11Q8TC12 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
RDH11Q8TC12 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RDH11Q8TC12 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RDH11Q8TC12 UNC93B3-201ENST00000308076 687 ntBASIC20.49■□□□□ 0.87
RDH11Q8TC12 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RDH11Q8TC12 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.49■□□□□ 0.87
RDH11Q8TC12 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RDH11Q8TC12 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RDH11Q8TC12 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.49■□□□□ 0.87
RDH11Q8TC12 AC096631.2-201ENST00000436136 790 ntBASIC20.49■□□□□ 0.87
RDH11Q8TC12 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RDH11Q8TC12 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RDH11Q8TC12 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.49■□□□□ 0.87
RDH11Q8TC12 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RDH11Q8TC12 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RDH11Q8TC12 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.49■□□□□ 0.87
RDH11Q8TC12 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RDH11Q8TC12 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RDH11Q8TC12 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RDH11Q8TC12 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RDH11Q8TC12 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RDH11Q8TC12 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RDH11Q8TC12 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.48■□□□□ 0.87
RDH11Q8TC12 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.48■□□□□ 0.87
RDH11Q8TC12 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RDH11Q8TC12 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.48■□□□□ 0.87
RDH11Q8TC12 AL121603.2-201ENST00000557373 2117 ntBASIC20.48■□□□□ 0.87
RDH11Q8TC12 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RDH11Q8TC12 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RDH11Q8TC12 BX005040.4-201ENST00000637145 1518 ntBASIC20.48■□□□□ 0.87
RDH11Q8TC12 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RDH11Q8TC12 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RDH11Q8TC12 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 AC105233.4-201ENST00000642045 216 ntBASIC20.47■□□□□ 0.87
RDH11Q8TC12 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RDH11Q8TC12 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RDH11Q8TC12 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RDH11Q8TC12 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.47■□□□□ 0.87
RDH11Q8TC12 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RDH11Q8TC12 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RDH11Q8TC12 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RDH11Q8TC12 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RDH11Q8TC12 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.46■□□□□ 0.87
RDH11Q8TC12 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RDH11Q8TC12 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RDH11Q8TC12 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RDH11Q8TC12 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RDH11Q8TC12 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RDH11Q8TC12 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RDH11Q8TC12 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RDH11Q8TC12 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.45■□□□□ 0.86
RDH11Q8TC12 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
RDH11Q8TC12 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RDH11Q8TC12 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RDH11Q8TC12 AC024257.2-201ENST00000549699 147 ntBASIC20.45■□□□□ 0.86
RDH11Q8TC12 AL136162.1-201ENST00000607711 1078 ntBASIC20.45■□□□□ 0.86
RDH11Q8TC12 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RDH11Q8TC12 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RDH11Q8TC12 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RDH11Q8TC12 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RDH11Q8TC12 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
RDH11Q8TC12 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RDH11Q8TC12 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RDH11Q8TC12 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.45■□□□□ 0.86
RDH11Q8TC12 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RDH11Q8TC12 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RDH11Q8TC12 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms