Protein–RNA interactions for Protein: Q8NI51

CTCFL, Transcriptional repressor CTCFL, humanhuman

Predicted RBP Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFLQ8NI51 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CTCFLQ8NI51 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CTCFLQ8NI51 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CTCFLQ8NI51 AC010536.3-201ENST00000620306 533 ntBASIC24.33■■□□□ 1.49
CTCFLQ8NI51 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CTCFLQ8NI51 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
CTCFLQ8NI51 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CTCFLQ8NI51 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CTCFLQ8NI51 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CTCFLQ8NI51 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CTCFLQ8NI51 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 AC245052.3-201ENST00000450182 901 ntBASIC24.32■■□□□ 1.48
CTCFLQ8NI51 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTCFLQ8NI51 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 AC080038.1-201ENST00000611274 1154 ntBASIC24.31■■□□□ 1.48
CTCFLQ8NI51 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.31■■□□□ 1.48
CTCFLQ8NI51 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CTCFLQ8NI51 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CTCFLQ8NI51 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.3■■□□□ 1.48
CTCFLQ8NI51 RBM17P2-201ENST00000616397 1405 ntBASIC24.3■■□□□ 1.48
CTCFLQ8NI51 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.3■■□□□ 1.48
CTCFLQ8NI51 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.3■■□□□ 1.48
CTCFLQ8NI51 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.3■■□□□ 1.48
CTCFLQ8NI51 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CTCFLQ8NI51 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CTCFLQ8NI51 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CTCFLQ8NI51 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CTCFLQ8NI51 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 AL024507.2-201ENST00000606070 2574 ntBASIC24.29■■□□□ 1.48
CTCFLQ8NI51 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 TERF1P5-201ENST00000477545 1207 ntBASIC24.29■■□□□ 1.48
CTCFLQ8NI51 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CTCFLQ8NI51 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CTCFLQ8NI51 AC026310.3-201ENST00000625186 2373 ntBASIC24.28■■□□□ 1.48
CTCFLQ8NI51 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
CTCFLQ8NI51 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CTCFLQ8NI51 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.28■■□□□ 1.48
CTCFLQ8NI51 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.28■■□□□ 1.48
CTCFLQ8NI51 DUX4L16-201ENST00000555130 1264 ntBASIC24.28■■□□□ 1.48
CTCFLQ8NI51 AC243732.1-201ENST00000612648 864 ntBASIC24.28■■□□□ 1.48
CTCFLQ8NI51 RARRES2P11-201ENST00000635158 484 ntBASIC24.28■■□□□ 1.48
CTCFLQ8NI51 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CTCFLQ8NI51 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CTCFLQ8NI51 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CTCFLQ8NI51 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 FEM1AP4-201ENST00000443167 1987 ntBASIC24.27■■□□□ 1.48
CTCFLQ8NI51 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.27■■□□□ 1.48
CTCFLQ8NI51 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CTCFLQ8NI51 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CTCFLQ8NI51 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.26■■□□□ 1.47
CTCFLQ8NI51 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms