Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 PLK5-205ENST00000642079 1969 ntBASIC17.3■□□□□ 0.36
ZNF546Q86UE3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 BHLHE23-202ENST00000612929 1109 ntBASIC17.3■□□□□ 0.36
ZNF546Q86UE3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF546Q86UE3 AC116562.4-201ENST00000641316 2276 ntBASIC17.3■□□□□ 0.36
ZNF546Q86UE3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 AC074183.2-201ENST00000623112 922 ntBASIC17.29■□□□□ 0.36
ZNF546Q86UE3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ZNF546Q86UE3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 DUX4L18-201ENST00000553347 1267 ntBASIC17.28■□□□□ 0.36
ZNF546Q86UE3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZNF546Q86UE3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF546Q86UE3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ZNF546Q86UE3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF546Q86UE3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.27■□□□□ 0.35
ZNF546Q86UE3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF546Q86UE3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF546Q86UE3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.27■□□□□ 0.35
ZNF546Q86UE3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.27■□□□□ 0.35
ZNF546Q86UE3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF546Q86UE3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 AC026471.1-201ENST00000564629 3026 ntBASIC17.26■□□□□ 0.35
ZNF546Q86UE3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms