Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SYVN1Q86TM6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SYVN1Q86TM6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYVN1Q86TM6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 AL157384.1-201ENST00000445995 2473 ntBASIC20.46■□□□□ 0.87
SYVN1Q86TM6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 KRT18P61-201ENST00000585825 1298 ntBASIC20.46■□□□□ 0.87
SYVN1Q86TM6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.46■□□□□ 0.87
SYVN1Q86TM6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.46■□□□□ 0.87
SYVN1Q86TM6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SYVN1Q86TM6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SYVN1Q86TM6 AP004607.4-201ENST00000530158 1459 ntBASIC20.45■□□□□ 0.86
SYVN1Q86TM6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 AC080038.1-201ENST00000611274 1154 ntBASIC20.45■□□□□ 0.86
SYVN1Q86TM6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.45■□□□□ 0.86
SYVN1Q86TM6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SYVN1Q86TM6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.44■□□□□ 0.86
SYVN1Q86TM6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYVN1Q86TM6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYVN1Q86TM6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SYVN1Q86TM6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SYVN1Q86TM6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SYVN1Q86TM6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.44■□□□□ 0.86
SYVN1Q86TM6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.44■□□□□ 0.86
SYVN1Q86TM6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SYVN1Q86TM6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.43■□□□□ 0.86
SYVN1Q86TM6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 KRT19P1-201ENST00000405746 1186 ntBASIC20.43■□□□□ 0.86
SYVN1Q86TM6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 AC055733.4-201ENST00000638462 1354 ntBASIC20.43■□□□□ 0.86
SYVN1Q86TM6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 AC009237.3-201ENST00000393279 1427 ntBASIC20.43■□□□□ 0.86
SYVN1Q86TM6 AC004854.2-201ENST00000608450 1441 ntBASIC20.43■□□□□ 0.86
SYVN1Q86TM6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.43■□□□□ 0.86
SYVN1Q86TM6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYVN1Q86TM6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SYVN1Q86TM6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYVN1Q86TM6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SYVN1Q86TM6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYVN1Q86TM6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SYVN1Q86TM6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms