Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.69■□□□□ 0.9
YTHDF3Q7Z739 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 AC005082.1-201ENST00000413042 2259 ntBASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
YTHDF3Q7Z739 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 DUX4L4-201ENST00000566884 1269 ntBASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
YTHDF3Q7Z739 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
YTHDF3Q7Z739 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 AC007225.1-201ENST00000566331 1836 ntBASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
YTHDF3Q7Z739 AC004687.1-201ENST00000579003 1625 ntBASIC20.64■□□□□ 0.9
YTHDF3Q7Z739 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 AC019171.1-201ENST00000601251 1056 ntBASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
YTHDF3Q7Z739 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 NEFHP1-201ENST00000412845 2629 ntBASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
YTHDF3Q7Z739 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.62■□□□□ 0.89
YTHDF3Q7Z739 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
YTHDF3Q7Z739 AC008406.3-201ENST00000620001 1374 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms