Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
USH1GQ495M9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.99■■□□□ 1.43
USH1GQ495M9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.99■■□□□ 1.43
USH1GQ495M9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
USH1GQ495M9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.99■■□□□ 1.43
USH1GQ495M9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
USH1GQ495M9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
USH1GQ495M9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.98■■□□□ 1.43
USH1GQ495M9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
USH1GQ495M9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USH1GQ495M9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.98■■□□□ 1.43
USH1GQ495M9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.98■■□□□ 1.43
USH1GQ495M9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.98■■□□□ 1.43
USH1GQ495M9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
USH1GQ495M9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.98■■□□□ 1.43
USH1GQ495M9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
USH1GQ495M9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USH1GQ495M9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
USH1GQ495M9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
USH1GQ495M9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.98■■□□□ 1.43
USH1GQ495M9 FBXW4P1-201ENST00000426721 2239 ntBASIC23.98■■□□□ 1.43
USH1GQ495M9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.98■■□□□ 1.43
USH1GQ495M9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
USH1GQ495M9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
USH1GQ495M9 MIPEPP3-201ENST00000412105 444 ntBASIC23.97■■□□□ 1.43
USH1GQ495M9 RARRES2P4-201ENST00000514074 484 ntBASIC23.97■■□□□ 1.43
USH1GQ495M9 AL162412.1-201ENST00000567129 965 ntBASIC23.97■■□□□ 1.43
USH1GQ495M9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.97■■□□□ 1.43
USH1GQ495M9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
USH1GQ495M9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USH1GQ495M9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
USH1GQ495M9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.96■■□□□ 1.43
USH1GQ495M9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USH1GQ495M9 AC069152.1-201ENST00000438030 544 ntBASIC23.96■■□□□ 1.43
USH1GQ495M9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
USH1GQ495M9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
USH1GQ495M9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
USH1GQ495M9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.95■■□□□ 1.42
USH1GQ495M9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.95■■□□□ 1.42
USH1GQ495M9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
USH1GQ495M9 AL512625.2-201ENST00000417533 625 ntBASIC23.95■■□□□ 1.42
USH1GQ495M9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.95■■□□□ 1.42
USH1GQ495M9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.95■■□□□ 1.42
USH1GQ495M9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.95■■□□□ 1.42
USH1GQ495M9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
USH1GQ495M9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
USH1GQ495M9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
USH1GQ495M9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
USH1GQ495M9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
USH1GQ495M9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.94■■□□□ 1.42
USH1GQ495M9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
USH1GQ495M9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.94■■□□□ 1.42
USH1GQ495M9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USH1GQ495M9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
USH1GQ495M9 BX276092.2-201ENST00000417668 665 ntBASIC23.94■■□□□ 1.42
USH1GQ495M9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.94■■□□□ 1.42
USH1GQ495M9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.94■■□□□ 1.42
USH1GQ495M9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.94■■□□□ 1.42
USH1GQ495M9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USH1GQ495M9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USH1GQ495M9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.94■■□□□ 1.42
USH1GQ495M9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.94■■□□□ 1.42
USH1GQ495M9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
USH1GQ495M9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
USH1GQ495M9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USH1GQ495M9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
USH1GQ495M9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USH1GQ495M9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.93■■□□□ 1.42
USH1GQ495M9 AC010980.2-201ENST00000587099 1412 ntBASIC23.93■■□□□ 1.42
USH1GQ495M9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.93■■□□□ 1.42
USH1GQ495M9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
USH1GQ495M9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USH1GQ495M9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
USH1GQ495M9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
USH1GQ495M9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USH1GQ495M9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
USH1GQ495M9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
USH1GQ495M9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
USH1GQ495M9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
USH1GQ495M9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
USH1GQ495M9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USH1GQ495M9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
USH1GQ495M9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.93■■□□□ 1.42
USH1GQ495M9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
USH1GQ495M9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
USH1GQ495M9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USH1GQ495M9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
USH1GQ495M9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USH1GQ495M9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
USH1GQ495M9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
USH1GQ495M9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.92■■□□□ 1.42
USH1GQ495M9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.92■■□□□ 1.42
USH1GQ495M9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.92■■□□□ 1.42
USH1GQ495M9 AC133041.1-202ENST00000642053 222 ntBASIC23.92■■□□□ 1.42
USH1GQ495M9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms