Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 OR7E47P-201ENST00000546390 1422 ntBASIC20.36■□□□□ 0.85
RSPO4Q2I0M5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 AC026471.5-201ENST00000615068 467 ntBASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.35■□□□□ 0.85
RSPO4Q2I0M5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 RARRES2P10-201ENST00000564312 460 ntBASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 AC145285.6-201ENST00000604632 637 ntBASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
RSPO4Q2I0M5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 MCRIP2P1-201ENST00000394346 511 ntBASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 KRASP1-201ENST00000407852 552 ntBASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 KRT18P57-201ENST00000443599 1254 ntBASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 AP003071.4-201ENST00000562276 1284 ntBASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 NTF6B-201ENST00000591913 560 ntBASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 AL121894.2-201ENST00000602977 491 ntBASIC20.33■□□□□ 0.85
RSPO4Q2I0M5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.33■□□□□ 0.84
RSPO4Q2I0M5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RSPO4Q2I0M5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RSPO4Q2I0M5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 AC087388.1-201ENST00000571370 1112 ntBASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RSPO4Q2I0M5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RSPO4Q2I0M5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.3■□□□□ 0.84
RSPO4Q2I0M5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms