Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH13P55290 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH13P55290 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH13P55290 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDH13P55290 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH13P55290 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH13P55290 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDH13P55290 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDH13P55290 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.36■□□□□ 0.85
CDH13P55290 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH13P55290 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CDH13P55290 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDH13P55290 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH13P55290 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH13P55290 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH13P55290 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH13P55290 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDH13P55290 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.35■□□□□ 0.85
CDH13P55290 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH13P55290 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH13P55290 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH13P55290 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH13P55290 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH13P55290 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.35■□□□□ 0.85
CDH13P55290 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH13P55290 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH13P55290 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH13P55290 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH13P55290 AC121338.2-201ENST00000622535 1744 ntBASIC20.35■□□□□ 0.85
CDH13P55290 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH13P55290 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH13P55290 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CDH13P55290 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH13P55290 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.34■□□□□ 0.85
CDH13P55290 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDH13P55290 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CDH13P55290 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH13P55290 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CDH13P55290 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH13P55290 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDH13P55290 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.33■□□□□ 0.85
CDH13P55290 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CDH13P55290 AC073314.1-201ENST00000568729 2216 ntBASIC20.33■□□□□ 0.85
CDH13P55290 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CDH13P55290 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
CDH13P55290 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH13P55290 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDH13P55290 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH13P55290 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH13P55290 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH13P55290 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.33■□□□□ 0.85
CDH13P55290 SUDS3P1-201ENST00000505831 966 ntBASIC20.33■□□□□ 0.85
CDH13P55290 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.33■□□□□ 0.85
CDH13P55290 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH13P55290 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH13P55290 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH13P55290 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CDH13P55290 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CDH13P55290 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH13P55290 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH13P55290 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH13P55290 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH13P55290 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH13P55290 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH13P55290 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH13P55290 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CDH13P55290 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.32■□□□□ 0.84
CDH13P55290 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH13P55290 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH13P55290 AC012414.1-201ENST00000556676 535 ntBASIC20.32■□□□□ 0.84
CDH13P55290 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH13P55290 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH13P55290 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH13P55290 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH13P55290 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH13P55290 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms