Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.51■■□□□ 1.67
PDE1AP54750 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDE1AP54750 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDE1AP54750 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
PDE1AP54750 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDE1AP54750 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PDE1AP54750 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
PDE1AP54750 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDE1AP54750 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
PDE1AP54750 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.5■■□□□ 1.67
PDE1AP54750 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDE1AP54750 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDE1AP54750 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PDE1AP54750 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PDE1AP54750 NTF6G-201ENST00000591094 616 ntBASIC25.5■■□□□ 1.67
PDE1AP54750 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.5■■□□□ 1.67
PDE1AP54750 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDE1AP54750 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDE1AP54750 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDE1AP54750 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.49■■□□□ 1.67
PDE1AP54750 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PDE1AP54750 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDE1AP54750 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDE1AP54750 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PDE1AP54750 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDE1AP54750 KRT18P20-201ENST00000548986 1279 ntBASIC25.49■■□□□ 1.67
PDE1AP54750 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
PDE1AP54750 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDE1AP54750 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDE1AP54750 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
PDE1AP54750 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDE1AP54750 AC121338.2-201ENST00000622535 1744 ntBASIC25.49■■□□□ 1.67
PDE1AP54750 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.48■■□□□ 1.67
PDE1AP54750 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
PDE1AP54750 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
PDE1AP54750 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDE1AP54750 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PDE1AP54750 KRT19P1-201ENST00000405746 1186 ntBASIC25.48■■□□□ 1.67
PDE1AP54750 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.48■■□□□ 1.67
PDE1AP54750 RARRES2P6-201ENST00000567333 442 ntBASIC25.48■■□□□ 1.67
PDE1AP54750 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PDE1AP54750 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PDE1AP54750 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.48■■□□□ 1.67
PDE1AP54750 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDE1AP54750 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
PDE1AP54750 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PDE1AP54750 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDE1AP54750 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDE1AP54750 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PDE1AP54750 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.47■■□□□ 1.67
PDE1AP54750 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.47■■□□□ 1.67
PDE1AP54750 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDE1AP54750 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PDE1AP54750 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDE1AP54750 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDE1AP54750 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.46■■□□□ 1.67
PDE1AP54750 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.46■■□□□ 1.67
PDE1AP54750 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDE1AP54750 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDE1AP54750 AC006128.1-201ENST00000624704 1661 ntBASIC25.46■■□□□ 1.67
PDE1AP54750 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.46■■□□□ 1.67
PDE1AP54750 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.46■■□□□ 1.67
PDE1AP54750 AC120498.10-201ENST00000621827 505 ntBASIC25.46■■□□□ 1.67
PDE1AP54750 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.46■■□□□ 1.67
PDE1AP54750 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDE1AP54750 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
PDE1AP54750 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.46■■□□□ 1.67
PDE1AP54750 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
PDE1AP54750 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PDE1AP54750 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PDE1AP54750 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PDE1AP54750 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PDE1AP54750 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDE1AP54750 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDE1AP54750 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PDE1AP54750 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.45■■□□□ 1.66
PDE1AP54750 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.45■■□□□ 1.66
PDE1AP54750 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.45■■□□□ 1.66
PDE1AP54750 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDE1AP54750 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
PDE1AP54750 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PDE1AP54750 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.44■■□□□ 1.66
PDE1AP54750 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDE1AP54750 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDE1AP54750 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.44■■□□□ 1.66
PDE1AP54750 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PDE1AP54750 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDE1AP54750 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.44■■□□□ 1.66
PDE1AP54750 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.44■■□□□ 1.66
PDE1AP54750 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDE1AP54750 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.44■■□□□ 1.66
PDE1AP54750 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDE1AP54750 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.44■■□□□ 1.66
PDE1AP54750 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDE1AP54750 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDE1AP54750 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDE1AP54750 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.44■■□□□ 1.66
PDE1AP54750 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.44■■□□□ 1.66
PDE1AP54750 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDE1AP54750 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms