Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF144AP50876 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF144AP50876 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF144AP50876 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF144AP50876 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF144AP50876 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF144AP50876 KRT87P-202ENST00000534226 1464 ntBASIC19.32■□□□□ 0.68
RNF144AP50876 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF144AP50876 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF144AP50876 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF144AP50876 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF144AP50876 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF144AP50876 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF144AP50876 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF144AP50876 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF144AP50876 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF144AP50876 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF144AP50876 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF144AP50876 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF144AP50876 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF144AP50876 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF144AP50876 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF144AP50876 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF144AP50876 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF144AP50876 TERF1P2-201ENST00000583350 1212 ntBASIC19.31■□□□□ 0.68
RNF144AP50876 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF144AP50876 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RNF144AP50876 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF144AP50876 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF144AP50876 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RNF144AP50876 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF144AP50876 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RNF144AP50876 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RNF144AP50876 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF144AP50876 EEF1DP3-203ENST00000566025 782 ntBASIC19.3■□□□□ 0.68
RNF144AP50876 KRT18P61-201ENST00000585825 1298 ntBASIC19.3■□□□□ 0.68
RNF144AP50876 AC104187.1-201ENST00000607510 612 ntBASIC19.3■□□□□ 0.68
RNF144AP50876 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF144AP50876 AC004854.2-201ENST00000608450 1441 ntBASIC19.3■□□□□ 0.68
RNF144AP50876 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF144AP50876 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF144AP50876 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF144AP50876 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF144AP50876 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF144AP50876 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF144AP50876 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF144AP50876 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF144AP50876 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF144AP50876 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF144AP50876 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF144AP50876 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF144AP50876 AC123595.1-201ENST00000440769 1046 ntBASIC19.29■□□□□ 0.68
RNF144AP50876 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF144AP50876 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF144AP50876 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF144AP50876 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF144AP50876 AC087623.3-201ENST00000607047 1098 ntBASIC19.29■□□□□ 0.68
RNF144AP50876 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
RNF144AP50876 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF144AP50876 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF144AP50876 AL049796.1-201ENST00000565336 1766 ntBASIC19.29■□□□□ 0.68
RNF144AP50876 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF144AP50876 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF144AP50876 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF144AP50876 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF144AP50876 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF144AP50876 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF144AP50876 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF144AP50876 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF144AP50876 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF144AP50876 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF144AP50876 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF144AP50876 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF144AP50876 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.28■□□□□ 0.68
RNF144AP50876 DUX4L2-201ENST00000561772 1275 ntBASIC19.28■□□□□ 0.68
RNF144AP50876 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
RNF144AP50876 DUX4L6-201ENST00000626483 1275 ntBASIC19.28■□□□□ 0.68
RNF144AP50876 DUX4L1-201ENST00000627662 1275 ntBASIC19.28■□□□□ 0.68
RNF144AP50876 DUX4L8-201ENST00000629013 1275 ntBASIC19.28■□□□□ 0.68
RNF144AP50876 DUX4L3-201ENST00000630187 1275 ntBASIC19.28■□□□□ 0.68
RNF144AP50876 DUX4L7-201ENST00000630678 1275 ntBASIC19.28■□□□□ 0.68
RNF144AP50876 DUX4L5-201ENST00000630834 1275 ntBASIC19.28■□□□□ 0.68
RNF144AP50876 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF144AP50876 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF144AP50876 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
RNF144AP50876 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF144AP50876 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF144AP50876 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
RNF144AP50876 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms