Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SLC6A9P48067 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A9P48067 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC6A9P48067 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A9P48067 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A9P48067 AL358852.1-201ENST00000623174 1268 ntBASIC18.37■□□□□ 0.53
SLC6A9P48067 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A9P48067 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC6A9P48067 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A9P48067 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC6A9P48067 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A9P48067 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC6A9P48067 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC6A9P48067 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A9P48067 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A9P48067 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A9P48067 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLC6A9P48067 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SLC6A9P48067 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC6A9P48067 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A9P48067 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A9P48067 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLC6A9P48067 MIR6084-201ENST00000622012 110 ntBASIC18.36■□□□□ 0.53
SLC6A9P48067 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A9P48067 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC6A9P48067 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC6A9P48067 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SLC6A9P48067 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A9P48067 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC6A9P48067 AC026271.2-201ENST00000428091 497 ntBASIC18.35■□□□□ 0.53
SLC6A9P48067 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A9P48067 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A9P48067 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SLC6A9P48067 AC073130.3-201ENST00000624389 2278 ntBASIC18.35■□□□□ 0.53
SLC6A9P48067 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SLC6A9P48067 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A9P48067 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A9P48067 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC6A9P48067 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC6A9P48067 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC6A9P48067 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A9P48067 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.34■□□□□ 0.53
SLC6A9P48067 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A9P48067 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A9P48067 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A9P48067 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A9P48067 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A9P48067 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A9P48067 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC6A9P48067 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A9P48067 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A9P48067 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC6A9P48067 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A9P48067 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A9P48067 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.33■□□□□ 0.52
SLC6A9P48067 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC6A9P48067 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A9P48067 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC6A9P48067 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A9P48067 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A9P48067 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC6A9P48067 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A9P48067 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A9P48067 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
SLC6A9P48067 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC6A9P48067 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms