Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCLP18206 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCLP18206 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCLP18206 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCLP18206 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCLP18206 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCLP18206 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
VCLP18206 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
VCLP18206 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.9■□□□□ 0.94
VCLP18206 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.9■□□□□ 0.94
VCLP18206 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.9■□□□□ 0.94
VCLP18206 AC022517.1-201ENST00000592429 346 ntBASIC20.9■□□□□ 0.94
VCLP18206 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.9■□□□□ 0.94
VCLP18206 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
VCLP18206 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.9■□□□□ 0.94
VCLP18206 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VCLP18206 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VCLP18206 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
VCLP18206 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
VCLP18206 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VCLP18206 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
VCLP18206 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VCLP18206 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VCLP18206 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VCLP18206 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
VCLP18206 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VCLP18206 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VCLP18206 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.89■□□□□ 0.93
VCLP18206 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.88■□□□□ 0.93
VCLP18206 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
VCLP18206 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCLP18206 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VCLP18206 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCLP18206 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCLP18206 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.88■□□□□ 0.93
VCLP18206 AC137761.2-201ENST00000561729 223 ntBASIC20.88■□□□□ 0.93
VCLP18206 AC145350.3-201ENST00000569033 163 ntBASIC20.88■□□□□ 0.93
VCLP18206 AL137784.2-201ENST00000607332 1000 ntBASIC20.88■□□□□ 0.93
VCLP18206 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VCLP18206 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCLP18206 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCLP18206 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.88■□□□□ 0.93
VCLP18206 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCLP18206 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCLP18206 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VCLP18206 AC016769.1-201ENST00000409132 1010 ntBASIC20.87■□□□□ 0.93
VCLP18206 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCLP18206 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.87■□□□□ 0.93
VCLP18206 AC104187.1-201ENST00000607510 612 ntBASIC20.87■□□□□ 0.93
VCLP18206 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VCLP18206 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCLP18206 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCLP18206 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCLP18206 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCLP18206 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCLP18206 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VCLP18206 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCLP18206 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.86■□□□□ 0.93
VCLP18206 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCLP18206 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCLP18206 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.86■□□□□ 0.93
VCLP18206 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCLP18206 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.86■□□□□ 0.93
VCLP18206 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCLP18206 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCLP18206 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCLP18206 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCLP18206 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCLP18206 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VCLP18206 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.86■□□□□ 0.93
VCLP18206 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCLP18206 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
VCLP18206 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.85■□□□□ 0.93
VCLP18206 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.85■□□□□ 0.93
VCLP18206 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.85■□□□□ 0.93
VCLP18206 AC053503.5-201ENST00000601508 636 ntBASIC20.85■□□□□ 0.93
VCLP18206 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VCLP18206 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCLP18206 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
VCLP18206 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
VCLP18206 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VCLP18206 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCLP18206 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.84■□□□□ 0.93
VCLP18206 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCLP18206 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCLP18206 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.84■□□□□ 0.93
VCLP18206 KRT18P11-201ENST00000435214 1283 ntBASIC20.84■□□□□ 0.93
VCLP18206 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.84■□□□□ 0.93
VCLP18206 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms