Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NCK1P16333 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCK1P16333 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.66■□□□□ 0.74
NCK1P16333 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NCK1P16333 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NCK1P16333 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NCK1P16333 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCK1P16333 AC020907.5-201ENST00000624372 1936 ntBASIC19.66■□□□□ 0.74
NCK1P16333 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
NCK1P16333 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.66■□□□□ 0.74
NCK1P16333 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCK1P16333 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCK1P16333 AC007225.1-201ENST00000566331 1836 ntBASIC19.65■□□□□ 0.74
NCK1P16333 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NCK1P16333 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCK1P16333 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.65■□□□□ 0.74
NCK1P16333 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.65■□□□□ 0.74
NCK1P16333 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.65■□□□□ 0.74
NCK1P16333 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCK1P16333 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCK1P16333 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCK1P16333 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NCK1P16333 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
NCK1P16333 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.65■□□□□ 0.74
NCK1P16333 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.65■□□□□ 0.74
NCK1P16333 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
NCK1P16333 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCK1P16333 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCK1P16333 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCK1P16333 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCK1P16333 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
NCK1P16333 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCK1P16333 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCK1P16333 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
NCK1P16333 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NCK1P16333 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NCK1P16333 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NCK1P16333 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCK1P16333 SLC47A1P1-202ENST00000449666 945 ntBASIC19.64■□□□□ 0.73
NCK1P16333 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.64■□□□□ 0.73
NCK1P16333 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NCK1P16333 MIR3621-201ENST00000580529 85 ntBASIC19.64■□□□□ 0.73
NCK1P16333 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.64■□□□□ 0.73
NCK1P16333 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NCK1P16333 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCK1P16333 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCK1P16333 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NCK1P16333 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCK1P16333 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NCK1P16333 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
NCK1P16333 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.63■□□□□ 0.73
NCK1P16333 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCK1P16333 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NCK1P16333 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NCK1P16333 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NCK1P16333 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCK1P16333 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.63■□□□□ 0.73
NCK1P16333 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCK1P16333 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCK1P16333 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCK1P16333 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCK1P16333 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NCK1P16333 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.63■□□□□ 0.73
NCK1P16333 AC092171.4-201ENST00000609130 632 ntBASIC19.63■□□□□ 0.73
NCK1P16333 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NCK1P16333 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NCK1P16333 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.63■□□□□ 0.73
NCK1P16333 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.63■□□□□ 0.73
NCK1P16333 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.63■□□□□ 0.73
NCK1P16333 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCK1P16333 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NCK1P16333 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NCK1P16333 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCK1P16333 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCK1P16333 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NCK1P16333 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.62■□□□□ 0.73
NCK1P16333 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.62■□□□□ 0.73
NCK1P16333 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
NCK1P16333 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.62■□□□□ 0.73
NCK1P16333 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCK1P16333 SERBP1P1-201ENST00000396021 1160 ntBASIC19.62■□□□□ 0.73
NCK1P16333 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCK1P16333 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NCK1P16333 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NCK1P16333 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.62■□□□□ 0.73
NCK1P16333 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCK1P16333 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NCK1P16333 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCK1P16333 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCK1P16333 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCK1P16333 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCK1P16333 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCK1P16333 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCK1P16333 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NCK1P16333 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NCK1P16333 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.61■□□□□ 0.73
NCK1P16333 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.61■□□□□ 0.73
NCK1P16333 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCK1P16333 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.61■□□□□ 0.73
NCK1P16333 AP005435.1-201ENST00000529293 1178 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms