Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
HOXC6P09630 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HOXC6P09630 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.7■■□□□ 1.38
HOXC6P09630 RPPH1-201ENST00000516869 333 ntBASIC23.7■■□□□ 1.38
HOXC6P09630 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HOXC6P09630 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.7■■□□□ 1.38
HOXC6P09630 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.7■■□□□ 1.38
HOXC6P09630 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.7■■□□□ 1.38
HOXC6P09630 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
HOXC6P09630 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
HOXC6P09630 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.69■■□□□ 1.38
HOXC6P09630 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.69■■□□□ 1.38
HOXC6P09630 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.69■■□□□ 1.38
HOXC6P09630 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HOXC6P09630 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
HOXC6P09630 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HOXC6P09630 MIR718-201ENST00000390190 70 ntBASIC23.69■■□□□ 1.38
HOXC6P09630 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.69■■□□□ 1.38
HOXC6P09630 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.69■■□□□ 1.38
HOXC6P09630 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.69■■□□□ 1.38
HOXC6P09630 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HOXC6P09630 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.69■■□□□ 1.38
HOXC6P09630 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.69■■□□□ 1.38
HOXC6P09630 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HOXC6P09630 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HOXC6P09630 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
HOXC6P09630 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HOXC6P09630 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HOXC6P09630 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HOXC6P09630 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
HOXC6P09630 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HOXC6P09630 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HOXC6P09630 KRT18P68-201ENST00000392293 1000 ntBASIC23.68■■□□□ 1.38
HOXC6P09630 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HOXC6P09630 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.68■■□□□ 1.38
HOXC6P09630 RN7SL471P-201ENST00000580476 299 ntBASIC23.68■■□□□ 1.38
HOXC6P09630 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.68■■□□□ 1.38
HOXC6P09630 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.68■■□□□ 1.38
HOXC6P09630 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.68■■□□□ 1.38
HOXC6P09630 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.67■■□□□ 1.38
HOXC6P09630 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.67■■□□□ 1.38
HOXC6P09630 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.67■■□□□ 1.38
HOXC6P09630 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
HOXC6P09630 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.67■■□□□ 1.38
HOXC6P09630 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HOXC6P09630 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HOXC6P09630 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
HOXC6P09630 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HOXC6P09630 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
HOXC6P09630 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.66■■□□□ 1.38
HOXC6P09630 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
HOXC6P09630 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HOXC6P09630 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HOXC6P09630 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HOXC6P09630 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HOXC6P09630 KRT17P3-201ENST00000420566 1262 ntBASIC23.66■■□□□ 1.38
HOXC6P09630 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HOXC6P09630 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
HOXC6P09630 AC092368.3-202ENST00000574180 1591 ntBASIC23.65■■□□□ 1.38
HOXC6P09630 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
HOXC6P09630 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
HOXC6P09630 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.65■■□□□ 1.38
HOXC6P09630 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HOXC6P09630 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HOXC6P09630 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HOXC6P09630 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
HOXC6P09630 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.65■■□□□ 1.38
HOXC6P09630 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.65■■□□□ 1.38
HOXC6P09630 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.65■■□□□ 1.38
HOXC6P09630 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
HOXC6P09630 MIR4497-201ENST00000583208 89 ntBASIC23.65■■□□□ 1.38
HOXC6P09630 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
HOXC6P09630 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HOXC6P09630 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HOXC6P09630 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
HOXC6P09630 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HOXC6P09630 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.65■■□□□ 1.38
HOXC6P09630 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HOXC6P09630 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.65■■□□□ 1.38
HOXC6P09630 C1orf229-201ENST00000623686 2258 ntBASIC23.64■■□□□ 1.38
HOXC6P09630 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
HOXC6P09630 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HOXC6P09630 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
HOXC6P09630 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
HOXC6P09630 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
HOXC6P09630 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
HOXC6P09630 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.64■■□□□ 1.37
HOXC6P09630 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.64■■□□□ 1.37
HOXC6P09630 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.64■■□□□ 1.37
HOXC6P09630 C1QBPP2-201ENST00000528754 825 ntBASIC23.64■■□□□ 1.37
HOXC6P09630 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
HOXC6P09630 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
HOXC6P09630 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
HOXC6P09630 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
HOXC6P09630 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
HOXC6P09630 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.63■■□□□ 1.37
HOXC6P09630 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HOXC6P09630 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HOXC6P09630 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HOXC6P09630 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms