Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFAP04085 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFAP04085 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFAP04085 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFAP04085 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFAP04085 AC097658.1-201ENST00000475555 843 ntBASIC19.44■□□□□ 0.7
PDGFAP04085 AC091874.3-201ENST00000512672 1195 ntBASIC19.44■□□□□ 0.7
PDGFAP04085 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFAP04085 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.44■□□□□ 0.7
PDGFAP04085 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFAP04085 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
PDGFAP04085 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PDGFAP04085 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.44■□□□□ 0.7
PDGFAP04085 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFAP04085 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFAP04085 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFAP04085 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.43■□□□□ 0.7
PDGFAP04085 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PDGFAP04085 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.43■□□□□ 0.7
PDGFAP04085 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PDGFAP04085 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.43■□□□□ 0.7
PDGFAP04085 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
PDGFAP04085 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.43■□□□□ 0.7
PDGFAP04085 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.43■□□□□ 0.7
PDGFAP04085 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.43■□□□□ 0.7
PDGFAP04085 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.43■□□□□ 0.7
PDGFAP04085 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.43■□□□□ 0.7
PDGFAP04085 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.43■□□□□ 0.7
PDGFAP04085 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFAP04085 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDGFAP04085 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.42■□□□□ 0.7
PDGFAP04085 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PDGFAP04085 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.42■□□□□ 0.7
PDGFAP04085 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.42■□□□□ 0.7
PDGFAP04085 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.42■□□□□ 0.7
PDGFAP04085 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDGFAP04085 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDGFAP04085 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.42■□□□□ 0.7
PDGFAP04085 AL137060.1-201ENST00000618151 2648 ntBASIC19.42■□□□□ 0.7
PDGFAP04085 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.42■□□□□ 0.7
PDGFAP04085 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PDGFAP04085 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFAP04085 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.42■□□□□ 0.7
PDGFAP04085 AC010980.2-201ENST00000587099 1412 ntBASIC19.42■□□□□ 0.7
PDGFAP04085 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.41■□□□□ 0.7
PDGFAP04085 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFAP04085 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFAP04085 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDGFAP04085 AL158047.1-201ENST00000445918 881 ntBASIC19.41■□□□□ 0.7
PDGFAP04085 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.41■□□□□ 0.7
PDGFAP04085 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.41■□□□□ 0.7
PDGFAP04085 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 AC006058.3-201ENST00000606217 1069 ntBASIC19.41■□□□□ 0.7
PDGFAP04085 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.41■□□□□ 0.7
PDGFAP04085 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFAP04085 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDGFAP04085 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFAP04085 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFAP04085 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFAP04085 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFAP04085 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.4■□□□□ 0.7
PDGFAP04085 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFAP04085 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms