Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.15■□□□□ 0.98
MT-ND3P03897 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND3P03897 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MT-ND3P03897 TSPY26P-201ENST00000476365 1326 ntBASIC21.15■□□□□ 0.98
MT-ND3P03897 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND3P03897 SLC47A1P1-202ENST00000449666 945 ntBASIC21.15■□□□□ 0.98
MT-ND3P03897 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND3P03897 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.15■□□□□ 0.98
MT-ND3P03897 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.15■□□□□ 0.98
MT-ND3P03897 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND3P03897 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND3P03897 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND3P03897 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND3P03897 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND3P03897 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND3P03897 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND3P03897 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
MT-ND3P03897 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
MT-ND3P03897 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MT-ND3P03897 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MT-ND3P03897 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MT-ND3P03897 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
MT-ND3P03897 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND3P03897 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND3P03897 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.14■□□□□ 0.97
MT-ND3P03897 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND3P03897 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND3P03897 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND3P03897 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.14■□□□□ 0.97
MT-ND3P03897 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND3P03897 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
MT-ND3P03897 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
MT-ND3P03897 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND3P03897 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND3P03897 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND3P03897 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MT-ND3P03897 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND3P03897 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND3P03897 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MT-ND3P03897 AL162430.1-201ENST00000480705 870 ntBASIC21.13■□□□□ 0.97
MT-ND3P03897 IGHV3-19-201ENST00000521488 291 ntBASIC21.13■□□□□ 0.97
MT-ND3P03897 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.13■□□□□ 0.97
MT-ND3P03897 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.13■□□□□ 0.97
MT-ND3P03897 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.13■□□□□ 0.97
MT-ND3P03897 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND3P03897 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND3P03897 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
MT-ND3P03897 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
MT-ND3P03897 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND3P03897 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND3P03897 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.13■□□□□ 0.97
MT-ND3P03897 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND3P03897 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.13■□□□□ 0.97
MT-ND3P03897 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND3P03897 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
MT-ND3P03897 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.12■□□□□ 0.97
MT-ND3P03897 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
MT-ND3P03897 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND3P03897 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND3P03897 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.12■□□□□ 0.97
MT-ND3P03897 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.12■□□□□ 0.97
MT-ND3P03897 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.12■□□□□ 0.97
MT-ND3P03897 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.12■□□□□ 0.97
MT-ND3P03897 AL358852.1-201ENST00000623174 1268 ntBASIC21.12■□□□□ 0.97
MT-ND3P03897 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MT-ND3P03897 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND3P03897 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND3P03897 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.11■□□□□ 0.97
MT-ND3P03897 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.11■□□□□ 0.97
MT-ND3P03897 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.11■□□□□ 0.97
MT-ND3P03897 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
MT-ND3P03897 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND3P03897 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.11■□□□□ 0.97
MT-ND3P03897 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND3P03897 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.11■□□□□ 0.97
MT-ND3P03897 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.11■□□□□ 0.97
MT-ND3P03897 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND3P03897 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND3P03897 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MT-ND3P03897 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.11■□□□□ 0.97
MT-ND3P03897 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MT-ND3P03897 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MT-ND3P03897 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.1■□□□□ 0.97
MT-ND3P03897 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND3P03897 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MT-ND3P03897 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND3P03897 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND3P03897 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
MT-ND3P03897 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND3P03897 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.1■□□□□ 0.97
MT-ND3P03897 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
MT-ND3P03897 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MT-ND3P03897 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.09■□□□□ 0.97
MT-ND3P03897 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.09■□□□□ 0.97
MT-ND3P03897 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
MT-ND3P03897 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
MT-ND3P03897 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
MT-ND3P03897 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
MT-ND3P03897 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MT-ND3P03897 AC006128.1-201ENST00000624704 1661 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms