Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 KRT18P11-201ENST00000435214 1283 ntBASIC20.76■□□□□ 0.91
PRAMEF1O95521 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.76■□□□□ 0.91
PRAMEF1O95521 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF1O95521 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.76■□□□□ 0.91
PRAMEF1O95521 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF1O95521 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEF1O95521 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.76■□□□□ 0.91
PRAMEF1O95521 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF1O95521 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF1O95521 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF1O95521 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF1O95521 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF1O95521 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF1O95521 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PRAMEF1O95521 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF1O95521 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.75■□□□□ 0.91
PRAMEF1O95521 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF1O95521 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.75■□□□□ 0.91
PRAMEF1O95521 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF1O95521 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.75■□□□□ 0.91
PRAMEF1O95521 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.75■□□□□ 0.91
PRAMEF1O95521 SLC7A5P1-201ENST00000568957 537 ntBASIC20.75■□□□□ 0.91
PRAMEF1O95521 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.75■□□□□ 0.91
PRAMEF1O95521 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF1O95521 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.75■□□□□ 0.91
PRAMEF1O95521 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF1O95521 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.75■□□□□ 0.91
PRAMEF1O95521 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF1O95521 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PRAMEF1O95521 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF1O95521 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF1O95521 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PRAMEF1O95521 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF1O95521 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.74■□□□□ 0.91
PRAMEF1O95521 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.74■□□□□ 0.91
PRAMEF1O95521 AC006015.1-201ENST00000429970 570 ntBASIC20.74■□□□□ 0.91
PRAMEF1O95521 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF1O95521 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF1O95521 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF1O95521 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF1O95521 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF1O95521 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF1O95521 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.74■□□□□ 0.91
PRAMEF1O95521 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF1O95521 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF1O95521 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF1O95521 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF1O95521 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.73■□□□□ 0.91
PRAMEF1O95521 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF1O95521 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF1O95521 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRAMEF1O95521 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEF1O95521 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF1O95521 AC245052.3-201ENST00000450182 901 ntBASIC20.73■□□□□ 0.91
PRAMEF1O95521 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PRAMEF1O95521 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF1O95521 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF1O95521 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF1O95521 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF1O95521 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF1O95521 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF1O95521 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF1O95521 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF1O95521 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF1O95521 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF1O95521 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF1O95521 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF1O95521 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF1O95521 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF1O95521 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF1O95521 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PRAMEF1O95521 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF1O95521 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.71■□□□□ 0.91
PRAMEF1O95521 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF1O95521 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF1O95521 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF1O95521 RARRES2P11-201ENST00000635158 484 ntBASIC20.71■□□□□ 0.91
PRAMEF1O95521 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF1O95521 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.71■□□□□ 0.91
PRAMEF1O95521 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF1O95521 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
PRAMEF1O95521 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF1O95521 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.7■□□□□ 0.9
PRAMEF1O95521 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF1O95521 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.7■□□□□ 0.9
PRAMEF1O95521 IKBKGP1-201ENST00000612193 1073 ntBASIC20.7■□□□□ 0.9
PRAMEF1O95521 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PRAMEF1O95521 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms