Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KDM4BO94953 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KDM4BO94953 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KDM4BO94953 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.21■□□□□ 0.51
KDM4BO94953 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
KDM4BO94953 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.21■□□□□ 0.51
KDM4BO94953 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDM4BO94953 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.21■□□□□ 0.51
KDM4BO94953 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
KDM4BO94953 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KDM4BO94953 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KDM4BO94953 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.21■□□□□ 0.51
KDM4BO94953 AL034346.1-201ENST00000568244 1277 ntBASIC18.21■□□□□ 0.51
KDM4BO94953 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.21■□□□□ 0.51
KDM4BO94953 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.21■□□□□ 0.51
KDM4BO94953 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KDM4BO94953 AL049796.1-201ENST00000565336 1766 ntBASIC18.21■□□□□ 0.51
KDM4BO94953 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDM4BO94953 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KDM4BO94953 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.21■□□□□ 0.51
KDM4BO94953 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
KDM4BO94953 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.2■□□□□ 0.5
KDM4BO94953 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
KDM4BO94953 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KDM4BO94953 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
KDM4BO94953 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KDM4BO94953 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
KDM4BO94953 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.2■□□□□ 0.5
KDM4BO94953 AL136116.3-201ENST00000402907 1138 ntBASIC18.2■□□□□ 0.5
KDM4BO94953 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KDM4BO94953 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KDM4BO94953 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.2■□□□□ 0.5
KDM4BO94953 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
KDM4BO94953 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KDM4BO94953 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KDM4BO94953 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDM4BO94953 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDM4BO94953 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.19■□□□□ 0.5
KDM4BO94953 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDM4BO94953 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDM4BO94953 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDM4BO94953 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDM4BO94953 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.19■□□□□ 0.5
KDM4BO94953 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.19■□□□□ 0.5
KDM4BO94953 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDM4BO94953 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDM4BO94953 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDM4BO94953 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.19■□□□□ 0.5
KDM4BO94953 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KDM4BO94953 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.19■□□□□ 0.5
KDM4BO94953 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
KDM4BO94953 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
KDM4BO94953 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
KDM4BO94953 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDM4BO94953 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
KDM4BO94953 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.18■□□□□ 0.5
KDM4BO94953 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDM4BO94953 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
KDM4BO94953 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.18■□□□□ 0.5
KDM4BO94953 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDM4BO94953 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDM4BO94953 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KDM4BO94953 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDM4BO94953 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDM4BO94953 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KDM4BO94953 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
KDM4BO94953 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
KDM4BO94953 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDM4BO94953 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KDM4BO94953 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KDM4BO94953 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
KDM4BO94953 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDM4BO94953 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDM4BO94953 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
KDM4BO94953 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.17■□□□□ 0.5
KDM4BO94953 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.17■□□□□ 0.5
KDM4BO94953 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDM4BO94953 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.17■□□□□ 0.5
KDM4BO94953 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.17■□□□□ 0.5
KDM4BO94953 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.17■□□□□ 0.5
KDM4BO94953 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KDM4BO94953 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.17■□□□□ 0.5
KDM4BO94953 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.17■□□□□ 0.5
KDM4BO94953 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDM4BO94953 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
KDM4BO94953 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KDM4BO94953 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
KDM4BO94953 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms