Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.67■□□□□ 0.58
UPK3AO75631 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.67■□□□□ 0.58
UPK3AO75631 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPK3AO75631 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.67■□□□□ 0.58
UPK3AO75631 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UPK3AO75631 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
UPK3AO75631 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPK3AO75631 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
UPK3AO75631 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
UPK3AO75631 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
UPK3AO75631 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UPK3AO75631 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.66■□□□□ 0.58
UPK3AO75631 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.66■□□□□ 0.58
UPK3AO75631 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.66■□□□□ 0.58
UPK3AO75631 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.66■□□□□ 0.58
UPK3AO75631 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.66■□□□□ 0.58
UPK3AO75631 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.66■□□□□ 0.58
UPK3AO75631 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK3AO75631 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UPK3AO75631 LINC01521-201ENST00000504184 1943 ntBASIC18.66■□□□□ 0.58
UPK3AO75631 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK3AO75631 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK3AO75631 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.66■□□□□ 0.58
UPK3AO75631 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPK3AO75631 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
UPK3AO75631 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
UPK3AO75631 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK3AO75631 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK3AO75631 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK3AO75631 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
UPK3AO75631 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UPK3AO75631 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UPK3AO75631 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.65■□□□□ 0.58
UPK3AO75631 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UPK3AO75631 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPK3AO75631 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UPK3AO75631 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK3AO75631 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK3AO75631 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK3AO75631 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK3AO75631 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
UPK3AO75631 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK3AO75631 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK3AO75631 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UPK3AO75631 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.64■□□□□ 0.57
UPK3AO75631 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK3AO75631 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.64■□□□□ 0.57
UPK3AO75631 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UPK3AO75631 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK3AO75631 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK3AO75631 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
UPK3AO75631 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UPK3AO75631 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UPK3AO75631 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.64■□□□□ 0.57
UPK3AO75631 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
UPK3AO75631 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.63■□□□□ 0.57
UPK3AO75631 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
UPK3AO75631 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.63■□□□□ 0.57
UPK3AO75631 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.63■□□□□ 0.57
UPK3AO75631 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.63■□□□□ 0.57
UPK3AO75631 AC138907.5-202ENST00000569484 235 ntBASIC18.63■□□□□ 0.57
UPK3AO75631 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
UPK3AO75631 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
UPK3AO75631 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UPK3AO75631 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.63■□□□□ 0.57
UPK3AO75631 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
UPK3AO75631 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.63■□□□□ 0.57
UPK3AO75631 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.63■□□□□ 0.57
UPK3AO75631 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK3AO75631 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
UPK3AO75631 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.62■□□□□ 0.57
UPK3AO75631 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
UPK3AO75631 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK3AO75631 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.62■□□□□ 0.57
UPK3AO75631 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK3AO75631 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UPK3AO75631 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms