Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.11■□□□□ 0.81
CNOT3O75175 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.11■□□□□ 0.81
CNOT3O75175 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.11■□□□□ 0.81
CNOT3O75175 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT3O75175 MFSD11-216ENST00000590393 1141 ntBASIC20.11■□□□□ 0.81
CNOT3O75175 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT3O75175 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT3O75175 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT3O75175 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CNOT3O75175 AP006587.3-201ENST00000525742 1516 ntBASIC20.11■□□□□ 0.81
CNOT3O75175 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT3O75175 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CNOT3O75175 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CNOT3O75175 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CNOT3O75175 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.1■□□□□ 0.81
CNOT3O75175 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.1■□□□□ 0.81
CNOT3O75175 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.1■□□□□ 0.81
CNOT3O75175 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.1■□□□□ 0.81
CNOT3O75175 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.1■□□□□ 0.81
CNOT3O75175 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.1■□□□□ 0.81
CNOT3O75175 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.1■□□□□ 0.81
CNOT3O75175 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.1■□□□□ 0.81
CNOT3O75175 AP001160.3-201ENST00000601484 763 ntBASIC20.1■□□□□ 0.81
CNOT3O75175 UBE2DNL-204ENST00000602536 740 ntBASIC20.1■□□□□ 0.81
CNOT3O75175 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT3O75175 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 KRT18P11-201ENST00000435214 1283 ntBASIC20.09■□□□□ 0.81
CNOT3O75175 CROCCP5-201ENST00000436658 830 ntBASIC20.09■□□□□ 0.81
CNOT3O75175 AC026185.1-201ENST00000445748 174 ntBASIC20.09■□□□□ 0.81
CNOT3O75175 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CNOT3O75175 AL034346.1-201ENST00000568244 1277 ntBASIC20.09■□□□□ 0.81
CNOT3O75175 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.09■□□□□ 0.81
CNOT3O75175 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
CNOT3O75175 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CNOT3O75175 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CNOT3O75175 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT3O75175 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.09■□□□□ 0.81
CNOT3O75175 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT3O75175 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.08■□□□□ 0.81
CNOT3O75175 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT3O75175 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT3O75175 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT3O75175 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.08■□□□□ 0.81
CNOT3O75175 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT3O75175 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT3O75175 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT3O75175 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT3O75175 HLA-L-209ENST00000420110 1011 ntBASIC20.08■□□□□ 0.81
CNOT3O75175 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT3O75175 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.08■□□□□ 0.81
CNOT3O75175 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT3O75175 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
CNOT3O75175 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT3O75175 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT3O75175 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT3O75175 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CNOT3O75175 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.07■□□□□ 0.8
CNOT3O75175 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT3O75175 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT3O75175 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT3O75175 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT3O75175 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT3O75175 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.07■□□□□ 0.8
CNOT3O75175 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.07■□□□□ 0.8
CNOT3O75175 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT3O75175 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.07■□□□□ 0.8
CNOT3O75175 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT3O75175 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT3O75175 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT3O75175 AF106564.1-201ENST00000607058 2553 ntBASIC20.07■□□□□ 0.8
CNOT3O75175 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CNOT3O75175 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT3O75175 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT3O75175 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CNOT3O75175 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.07■□□□□ 0.8
CNOT3O75175 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT3O75175 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT3O75175 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms