Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN2BO60939 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN2BO60939 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN2BO60939 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN2BO60939 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.77■□□□□ 0.76
SCN2BO60939 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN2BO60939 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SCN2BO60939 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.76■□□□□ 0.75
SCN2BO60939 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN2BO60939 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN2BO60939 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SCN2BO60939 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN2BO60939 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SCN2BO60939 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN2BO60939 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SCN2BO60939 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SCN2BO60939 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN2BO60939 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN2BO60939 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.76■□□□□ 0.75
SCN2BO60939 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SCN2BO60939 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.76■□□□□ 0.75
SCN2BO60939 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN2BO60939 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN2BO60939 AC091305.1-201ENST00000479476 895 ntBASIC19.76■□□□□ 0.75
SCN2BO60939 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.76■□□□□ 0.75
SCN2BO60939 AC012414.1-201ENST00000556676 535 ntBASIC19.76■□□□□ 0.75
SCN2BO60939 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
SCN2BO60939 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN2BO60939 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN2BO60939 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN2BO60939 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN2BO60939 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN2BO60939 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
SCN2BO60939 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN2BO60939 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN2BO60939 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN2BO60939 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN2BO60939 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN2BO60939 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.75■□□□□ 0.75
SCN2BO60939 SUDS3P1-201ENST00000505831 966 ntBASIC19.75■□□□□ 0.75
SCN2BO60939 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN2BO60939 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN2BO60939 EEF1DP3-203ENST00000566025 782 ntBASIC19.75■□□□□ 0.75
SCN2BO60939 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN2BO60939 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN2BO60939 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN2BO60939 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN2BO60939 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN2BO60939 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SCN2BO60939 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SCN2BO60939 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCN2BO60939 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.74■□□□□ 0.75
SCN2BO60939 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCN2BO60939 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN2BO60939 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SCN2BO60939 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN2BO60939 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN2BO60939 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.73■□□□□ 0.75
SCN2BO60939 AC092667.1-201ENST00000434301 2586 ntBASIC19.73■□□□□ 0.75
SCN2BO60939 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN2BO60939 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.73■□□□□ 0.75
SCN2BO60939 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.73■□□□□ 0.75
SCN2BO60939 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.73■□□□□ 0.75
SCN2BO60939 TPRG1LP1-201ENST00000598702 760 ntBASIC19.73■□□□□ 0.75
SCN2BO60939 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN2BO60939 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN2BO60939 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.73■□□□□ 0.75
SCN2BO60939 AP005212.1-201ENST00000581547 1997 ntBASIC19.73■□□□□ 0.75
SCN2BO60939 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.73■□□□□ 0.75
SCN2BO60939 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN2BO60939 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN2BO60939 AC121338.2-201ENST00000622535 1744 ntBASIC19.73■□□□□ 0.75
SCN2BO60939 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN2BO60939 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN2BO60939 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN2BO60939 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SCN2BO60939 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN2BO60939 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN2BO60939 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN2BO60939 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN2BO60939 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN2BO60939 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.72■□□□□ 0.75
SCN2BO60939 AC053503.5-201ENST00000601508 636 ntBASIC19.72■□□□□ 0.75
SCN2BO60939 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SCN2BO60939 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN2BO60939 AC073314.1-201ENST00000568729 2216 ntBASIC19.72■□□□□ 0.75
SCN2BO60939 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SCN2BO60939 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN2BO60939 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms