Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNSO60931 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNSO60931 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CTNSO60931 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNSO60931 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNSO60931 RBM17P2-201ENST00000616397 1405 ntBASIC19.58■□□□□ 0.72
CTNSO60931 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNSO60931 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNSO60931 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.57■□□□□ 0.72
CTNSO60931 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNSO60931 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CTNSO60931 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTNSO60931 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
CTNSO60931 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.57■□□□□ 0.72
CTNSO60931 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.57■□□□□ 0.72
CTNSO60931 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTNSO60931 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTNSO60931 AC080038.1-201ENST00000611274 1154 ntBASIC19.57■□□□□ 0.72
CTNSO60931 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTNSO60931 RARRES2P11-201ENST00000635158 484 ntBASIC19.57■□□□□ 0.72
CTNSO60931 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNSO60931 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNSO60931 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNSO60931 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CTNSO60931 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.56■□□□□ 0.72
CTNSO60931 AC026310.3-201ENST00000625186 2373 ntBASIC19.56■□□□□ 0.72
CTNSO60931 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNSO60931 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.56■□□□□ 0.72
CTNSO60931 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.56■□□□□ 0.72
CTNSO60931 DUX4L16-201ENST00000555130 1264 ntBASIC19.56■□□□□ 0.72
CTNSO60931 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.56■□□□□ 0.72
CTNSO60931 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
CTNSO60931 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.56■□□□□ 0.72
CTNSO60931 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTNSO60931 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.56■□□□□ 0.72
CTNSO60931 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CTNSO60931 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNSO60931 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTNSO60931 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTNSO60931 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNSO60931 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.56■□□□□ 0.72
CTNSO60931 FEM1AP4-201ENST00000443167 1987 ntBASIC19.55■□□□□ 0.72
CTNSO60931 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.55■□□□□ 0.72
CTNSO60931 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.55■□□□□ 0.72
CTNSO60931 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.55■□□□□ 0.72
CTNSO60931 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.55■□□□□ 0.72
CTNSO60931 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CTNSO60931 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTNSO60931 AL024507.2-201ENST00000606070 2574 ntBASIC19.55■□□□□ 0.72
CTNSO60931 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.55■□□□□ 0.72
CTNSO60931 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTNSO60931 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CTNSO60931 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.54■□□□□ 0.72
CTNSO60931 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTNSO60931 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.54■□□□□ 0.72
CTNSO60931 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.54■□□□□ 0.72
CTNSO60931 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.54■□□□□ 0.72
CTNSO60931 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CTNSO60931 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTNSO60931 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNSO60931 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNSO60931 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CTNSO60931 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.53■□□□□ 0.72
CTNSO60931 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNSO60931 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNSO60931 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNSO60931 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNSO60931 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNSO60931 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNSO60931 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNSO60931 AC013268.1-206ENST00000638368 961 ntBASIC19.53■□□□□ 0.72
CTNSO60931 AC112229.1-201ENST00000639295 961 ntBASIC19.53■□□□□ 0.72
CTNSO60931 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNSO60931 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNSO60931 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNSO60931 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNSO60931 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNSO60931 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNSO60931 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNSO60931 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CTNSO60931 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNSO60931 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNSO60931 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CTNSO60931 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.52■□□□□ 0.72
CTNSO60931 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTNSO60931 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CTNSO60931 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms