Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.58■□□□□ 0.57
TRAF3IP2O43734 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.58■□□□□ 0.57
TRAF3IP2O43734 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAF3IP2O43734 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TRAF3IP2O43734 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP2O43734 KRT18P5-201ENST00000436075 1291 ntBASIC18.58■□□□□ 0.56
TRAF3IP2O43734 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAF3IP2O43734 KRT18P20-201ENST00000548986 1279 ntBASIC18.58■□□□□ 0.56
TRAF3IP2O43734 SLC7A5P2-201ENST00000553010 536 ntBASIC18.58■□□□□ 0.56
TRAF3IP2O43734 AC120498.10-201ENST00000621827 505 ntBASIC18.58■□□□□ 0.56
TRAF3IP2O43734 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.58■□□□□ 0.56
TRAF3IP2O43734 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP2O43734 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
TRAF3IP2O43734 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP2O43734 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP2O43734 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRAF3IP2O43734 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAF3IP2O43734 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAF3IP2O43734 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRAF3IP2O43734 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP2O43734 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAF3IP2O43734 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP2O43734 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP2O43734 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
TRAF3IP2O43734 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP2O43734 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.55■□□□□ 0.56
TRAF3IP2O43734 MIR5787-201ENST00000611784 55 ntBASIC18.55■□□□□ 0.56
TRAF3IP2O43734 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.55■□□□□ 0.56
TRAF3IP2O43734 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP2O43734 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP2O43734 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAF3IP2O43734 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP2O43734 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP2O43734 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRAF3IP2O43734 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAF3IP2O43734 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.54■□□□□ 0.56
TRAF3IP2O43734 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAF3IP2O43734 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP2O43734 RARRES2P11-201ENST00000635158 484 ntBASIC18.54■□□□□ 0.56
TRAF3IP2O43734 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAF3IP2O43734 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP2O43734 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAF3IP2O43734 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 AL162430.1-201ENST00000480705 870 ntBASIC18.53■□□□□ 0.56
TRAF3IP2O43734 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 SLC7A5P1-201ENST00000568957 537 ntBASIC18.53■□□□□ 0.56
TRAF3IP2O43734 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAF3IP2O43734 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms