Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.98■□□□□ 0.79
NDUFS4O43181 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NDUFS4O43181 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.98■□□□□ 0.79
NDUFS4O43181 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.98■□□□□ 0.79
NDUFS4O43181 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.98■□□□□ 0.79
NDUFS4O43181 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.98■□□□□ 0.79
NDUFS4O43181 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NDUFS4O43181 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.98■□□□□ 0.79
NDUFS4O43181 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFS4O43181 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFS4O43181 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFS4O43181 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFS4O43181 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NDUFS4O43181 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.97■□□□□ 0.79
NDUFS4O43181 KRT18P11-201ENST00000435214 1283 ntBASIC19.97■□□□□ 0.79
NDUFS4O43181 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.97■□□□□ 0.79
NDUFS4O43181 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.97■□□□□ 0.79
NDUFS4O43181 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
NDUFS4O43181 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFS4O43181 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFS4O43181 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFS4O43181 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NDUFS4O43181 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.96■□□□□ 0.79
NDUFS4O43181 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.96■□□□□ 0.79
NDUFS4O43181 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFS4O43181 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.96■□□□□ 0.79
NDUFS4O43181 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.96■□□□□ 0.79
NDUFS4O43181 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.96■□□□□ 0.79
NDUFS4O43181 MYCNOS-205ENST00000641950 531 ntBASIC19.96■□□□□ 0.79
NDUFS4O43181 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFS4O43181 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFS4O43181 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NDUFS4O43181 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFS4O43181 AL049796.1-201ENST00000565336 1766 ntBASIC19.95■□□□□ 0.78
NDUFS4O43181 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NDUFS4O43181 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.95■□□□□ 0.78
NDUFS4O43181 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFS4O43181 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFS4O43181 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.95■□□□□ 0.78
NDUFS4O43181 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFS4O43181 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NDUFS4O43181 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.95■□□□□ 0.78
NDUFS4O43181 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NDUFS4O43181 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NDUFS4O43181 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NDUFS4O43181 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.95■□□□□ 0.78
NDUFS4O43181 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.95■□□□□ 0.78
NDUFS4O43181 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFS4O43181 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFS4O43181 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.95■□□□□ 0.78
NDUFS4O43181 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFS4O43181 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.95■□□□□ 0.78
NDUFS4O43181 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.95■□□□□ 0.78
NDUFS4O43181 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.95■□□□□ 0.78
NDUFS4O43181 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NDUFS4O43181 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.95■□□□□ 0.78
NDUFS4O43181 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.95■□□□□ 0.78
NDUFS4O43181 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NDUFS4O43181 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NDUFS4O43181 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.94■□□□□ 0.78
NDUFS4O43181 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NDUFS4O43181 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.94■□□□□ 0.78
NDUFS4O43181 AC006015.1-201ENST00000429970 570 ntBASIC19.94■□□□□ 0.78
NDUFS4O43181 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.94■□□□□ 0.78
NDUFS4O43181 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.94■□□□□ 0.78
NDUFS4O43181 IKBKGP1-201ENST00000612193 1073 ntBASIC19.94■□□□□ 0.78
NDUFS4O43181 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
NDUFS4O43181 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.94■□□□□ 0.78
NDUFS4O43181 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NDUFS4O43181 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
NDUFS4O43181 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.93■□□□□ 0.78
NDUFS4O43181 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.93■□□□□ 0.78
NDUFS4O43181 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
NDUFS4O43181 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.93■□□□□ 0.78
NDUFS4O43181 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.93■□□□□ 0.78
NDUFS4O43181 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
NDUFS4O43181 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDUFS4O43181 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDUFS4O43181 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDUFS4O43181 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
NDUFS4O43181 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.93■□□□□ 0.78
NDUFS4O43181 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.93■□□□□ 0.78
NDUFS4O43181 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms