Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.71■□□□□ 0.75
CLOCKO15516 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.71■□□□□ 0.75
CLOCKO15516 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CLOCKO15516 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 AC024257.2-201ENST00000549699 147 ntBASIC19.71■□□□□ 0.75
CLOCKO15516 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.71■□□□□ 0.75
CLOCKO15516 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.71■□□□□ 0.75
CLOCKO15516 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 AC073314.1-201ENST00000568729 2216 ntBASIC19.71■□□□□ 0.75
CLOCKO15516 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
CLOCKO15516 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLOCKO15516 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLOCKO15516 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.7■□□□□ 0.74
CLOCKO15516 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLOCKO15516 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLOCKO15516 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.7■□□□□ 0.74
CLOCKO15516 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.7■□□□□ 0.74
CLOCKO15516 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLOCKO15516 AC006128.1-201ENST00000624704 1661 ntBASIC19.7■□□□□ 0.74
CLOCKO15516 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.7■□□□□ 0.74
CLOCKO15516 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.7■□□□□ 0.74
CLOCKO15516 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLOCKO15516 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.7■□□□□ 0.74
CLOCKO15516 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLOCKO15516 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLOCKO15516 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.7■□□□□ 0.74
CLOCKO15516 SYT6-210ENST00000641643 1587 ntBASIC19.7■□□□□ 0.74
CLOCKO15516 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.7■□□□□ 0.74
CLOCKO15516 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLOCKO15516 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CLOCKO15516 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.69■□□□□ 0.74
CLOCKO15516 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLOCKO15516 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.69■□□□□ 0.74
CLOCKO15516 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CLOCKO15516 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.69■□□□□ 0.74
CLOCKO15516 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
CLOCKO15516 DUX4L19-201ENST00000557448 1267 ntBASIC19.69■□□□□ 0.74
CLOCKO15516 AC092171.4-201ENST00000609130 632 ntBASIC19.69■□□□□ 0.74
CLOCKO15516 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CLOCKO15516 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CLOCKO15516 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLOCKO15516 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLOCKO15516 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.68■□□□□ 0.74
CLOCKO15516 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLOCKO15516 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLOCKO15516 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLOCKO15516 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.67■□□□□ 0.74
CLOCKO15516 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.67■□□□□ 0.74
CLOCKO15516 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.67■□□□□ 0.74
CLOCKO15516 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 AFG3L1P-217ENST00000557444 2447 ntBASIC19.67■□□□□ 0.74
CLOCKO15516 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.67■□□□□ 0.74
CLOCKO15516 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 PCDHAC2-203ENST00000615316 3011 ntBASIC19.67■□□□□ 0.74
CLOCKO15516 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLOCKO15516 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLOCKO15516 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLOCKO15516 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms