Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
GSC2O15499 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GSC2O15499 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
GSC2O15499 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GSC2O15499 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
GSC2O15499 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GSC2O15499 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GSC2O15499 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
GSC2O15499 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GSC2O15499 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GSC2O15499 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GSC2O15499 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GSC2O15499 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GSC2O15499 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GSC2O15499 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GSC2O15499 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GSC2O15499 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.06■□□□□ 0.8
GSC2O15499 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.06■□□□□ 0.8
GSC2O15499 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GSC2O15499 AC074183.2-201ENST00000623112 922 ntBASIC20.06■□□□□ 0.8
GSC2O15499 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GSC2O15499 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
GSC2O15499 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.05■□□□□ 0.8
GSC2O15499 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.05■□□□□ 0.8
GSC2O15499 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 AP000974.1-201ENST00000623909 2387 ntBASIC20.05■□□□□ 0.8
GSC2O15499 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GSC2O15499 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GSC2O15499 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GSC2O15499 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.04■□□□□ 0.8
GSC2O15499 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.04■□□□□ 0.8
GSC2O15499 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.04■□□□□ 0.8
GSC2O15499 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GSC2O15499 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GSC2O15499 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GSC2O15499 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.04■□□□□ 0.8
GSC2O15499 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
GSC2O15499 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GSC2O15499 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GSC2O15499 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
GSC2O15499 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.04■□□□□ 0.8
GSC2O15499 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GSC2O15499 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
GSC2O15499 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.04■□□□□ 0.8
GSC2O15499 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GSC2O15499 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
GSC2O15499 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GSC2O15499 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.03■□□□□ 0.8
GSC2O15499 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.03■□□□□ 0.8
GSC2O15499 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.03■□□□□ 0.8
GSC2O15499 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GSC2O15499 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GSC2O15499 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.03■□□□□ 0.8
GSC2O15499 AC137630.3-201ENST00000607245 391 ntBASIC20.03■□□□□ 0.8
GSC2O15499 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GSC2O15499 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.03■□□□□ 0.8
GSC2O15499 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GSC2O15499 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GSC2O15499 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GSC2O15499 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GSC2O15499 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GSC2O15499 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GSC2O15499 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GSC2O15499 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
GSC2O15499 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GSC2O15499 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GSC2O15499 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.02■□□□□ 0.8
GSC2O15499 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
GSC2O15499 ABHD17AP5-201ENST00000580133 923 ntBASIC20.02■□□□□ 0.8
GSC2O15499 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GSC2O15499 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GSC2O15499 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
GSC2O15499 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.02■□□□□ 0.8
GSC2O15499 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GSC2O15499 TNXA-203ENST00000507684 2038 ntBASIC20.02■□□□□ 0.79
GSC2O15499 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GSC2O15499 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GSC2O15499 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.01■□□□□ 0.79
GSC2O15499 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GSC2O15499 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GSC2O15499 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GSC2O15499 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
GSC2O15499 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GSC2O15499 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
GSC2O15499 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GSC2O15499 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GSC2O15499 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GSC2O15499 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GSC2O15499 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms