Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CACNB4O00305 LINC00565-201ENST00000562710 2331 ntBASIC20.63■□□□□ 0.89
CACNB4O00305 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB4O00305 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB4O00305 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.63■□□□□ 0.89
CACNB4O00305 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.63■□□□□ 0.89
CACNB4O00305 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB4O00305 AC142086.2-201ENST00000569753 217 ntBASIC20.63■□□□□ 0.89
CACNB4O00305 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB4O00305 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNB4O00305 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CACNB4O00305 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB4O00305 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB4O00305 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CACNB4O00305 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB4O00305 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.62■□□□□ 0.89
CACNB4O00305 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB4O00305 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CACNB4O00305 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB4O00305 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB4O00305 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB4O00305 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CACNB4O00305 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB4O00305 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.62■□□□□ 0.89
CACNB4O00305 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNB4O00305 AC016405.3-201ENST00000607710 860 ntBASIC20.62■□□□□ 0.89
CACNB4O00305 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB4O00305 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.62■□□□□ 0.89
CACNB4O00305 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.62■□□□□ 0.89
CACNB4O00305 MKRN4P-201ENST00000444706 1521 ntBASIC20.62■□□□□ 0.89
CACNB4O00305 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNB4O00305 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.61■□□□□ 0.89
CACNB4O00305 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.61■□□□□ 0.89
CACNB4O00305 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CACNB4O00305 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNB4O00305 AL512625.2-201ENST00000417533 625 ntBASIC20.61■□□□□ 0.89
CACNB4O00305 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CACNB4O00305 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.61■□□□□ 0.89
CACNB4O00305 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.61■□□□□ 0.89
CACNB4O00305 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNB4O00305 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.61■□□□□ 0.89
CACNB4O00305 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CACNB4O00305 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CACNB4O00305 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.6■□□□□ 0.89
CACNB4O00305 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 CDV3P1-201ENST00000471403 739 ntBASIC20.6■□□□□ 0.89
CACNB4O00305 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.6■□□□□ 0.89
CACNB4O00305 AL138781.1-201ENST00000566567 1274 ntBASIC20.6■□□□□ 0.89
CACNB4O00305 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.6■□□□□ 0.89
CACNB4O00305 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.6■□□□□ 0.89
CACNB4O00305 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNB4O00305 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.6■□□□□ 0.89
CACNB4O00305 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CACNB4O00305 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNB4O00305 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNB4O00305 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.59■□□□□ 0.89
CACNB4O00305 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNB4O00305 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNB4O00305 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNB4O00305 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNB4O00305 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CACNB4O00305 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CACNB4O00305 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.59■□□□□ 0.89
CACNB4O00305 RARRES2P4-201ENST00000514074 484 ntBASIC20.59■□□□□ 0.89
CACNB4O00305 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.59■□□□□ 0.89
CACNB4O00305 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.59■□□□□ 0.89
CACNB4O00305 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CACNB4O00305 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.59■□□□□ 0.89
CACNB4O00305 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CACNB4O00305 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNB4O00305 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CACNB4O00305 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CACNB4O00305 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB4O00305 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
CACNB4O00305 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
CACNB4O00305 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB4O00305 AC093787.1-201ENST00000450396 207 ntBASIC20.58■□□□□ 0.89
CACNB4O00305 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.58■□□□□ 0.89
CACNB4O00305 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.58■□□□□ 0.89
CACNB4O00305 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB4O00305 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CACNB4O00305 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CACNB4O00305 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.58■□□□□ 0.88
CACNB4O00305 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CACNB4O00305 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB4O00305 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNB4O00305 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB4O00305 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CACNB4O00305 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNB4O00305 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNB4O00305 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms