Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
TMEM256-PLSCR3K7ERE1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.21□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC13.21□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC098818.2-201ENST00000564925 2320 ntBASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms